Gene Information

Name : sce4290 (sce4290)
Accession : YP_001614933.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 6064564 - 6066930 bp
Length : 2367 bp
Strand : -
Note : -

DNA sequence :
ATGACTGAGACGCAGAGCCCTGTCGCTGTCCCGAGCCGCGCGGACAGCTCGTTCGATCCGGTCCCGCTCCTGGCCGAGGA
GCTGAGCCTCCCGCGCCAGGGGGTCTCGGCGGTGGCCAAGCTGCTCGCCGAGGGGGCGACGGTGCCGTTCATCGCCCGTT
ACCGCAAGGAAGCGACCGGCGGGCTCGACGAGGTGCAGATCCGCGCCATCGAGGAGCGCCGCGCCTACCTCATCGAGCTC
GAGGAGCGCCGCGCCACGGTGCTCACGGAGATCCAGAAGCAGGGCAAGCTCACCGACGCGCTCGCCTCGAAGATCCGCGC
CTGCAGCACCAAGGCCGAGCTCGAGGACCTCTATCTCCCCTTCAAGCCGAAGCGCCGCACGCGCGCCATCATCGCGAAGG
AGCGGGGCCTCGAGCCGCTCGCGGATCGCATGTGGTCGCAGCCGGGCGACGGCAGCCCCGAGGAGGAGGCCCGCGCGTTC
GTCAGCGCCGAGAAGGAGGTCCCCGACGCGGCGGCCGCCCTCGCCGGCGCGCGCGACATCTGCGCCGAGCGCATCGCCGA
GCACGCCGACGTGCGCAAGCTCGTCCGCGAGGCCTACGCGAAGGAAGGCGTCATCAAGGTCCAGAAGAACGAGGAGCACG
CGGCCAAGCAGACGAAGTTCGACATGTACGGGAGCTTCGAGGAGCCCGTCGCGAACATCCCGTCGCACCGCTACCTCGCG
ATCCGCCGCGGCGAGGCCGAGGGCGTGCTGCGCGCCTCGATCGAGCTCGCGCCCGAGCCGCTCGTCCCCCCGATCCACGC
CGCGGTGGGGCTGAAGCCGAAATCGCCGTGGGCCGGCGAGCTCACGAAGGCCGCCGACGACGCCGTGAAGCGGCTCTTGC
TCCCCGCGGTCCAGAGCGACGTGCGCGTCGACCTCAAGATGCAGGCCGATCGCGCCGCGGTCGATGTCTTCGCCCAGAAC
CTCCGCGAGCTCCTCCTCGCGGCGCCCTTCGGCACGCAGGCGGTGCTCGGCATCGACCCCGGCCAGCGCACCGGCTGCAA
GTGCGCCGTCGTCGACGAGACGGGCAAGCTCCTCGAGCACACGACGATCTACCTGGTCGGGAGCAGCGACTCGCTCGAGC
GCGCGCGCCAGGACCTGCGCCGCATCTGCCGCAAGTACCCGCTCCGCGCCGTCGCCGTGGGCAACGGCACGCACGGCCGC
GAGACCGAGGCGTTCGTGAAGGACGTGCTCGCGTCGGAGGGCCTGAAGGAGCTGTTCTGCGTCCCGGTGAGCGAGGCGGG
CGCGAGCGTCTACTCGGCGAGCGAGGTCGCGCGCGAGGAGTTCCCCGACCTCGACCTCACGGTGCGCGGCGCGATCAGCA
TCGCCCGCAGGCTGCAGGACCCGCTCGCGGAGCTCGTGAAGGTCGACCCGAAGAGCATCGGCGTCGGCCAGTACCAGCAC
GACGTCTACCAGGGCCTGCTCGCGCGGAAGCTCGATGAGGTCGTCGAGAGCTGCGTCAACCTGGTCGGCGTCGAGCTCAA
CACGGCGAGCGCCCCGCTGCTCGCCCGCGTCGCCGGCATCGGCCCGAGCCTCGCGAAGAAGATCGTCGCCCACCGCGACC
TGAACGGCGCGTTCAAGAGCCGCAAGGCGCTGCTCGACGTGCCCGGCGTCGGCCCGCGGACGTTCGAGCAGGCCGCGGGC
TTCGTGCGGGTCCGGGGCGGGGAGCACCCGCTCGACGCGAGCGCCGTGCACCCGGAGCGCTACGGCCTCGTCGAGCGCAT
CGCGGCGGATCTCGGCGTGCCGGTCGGGTCGCTCATCGGCGACACGGCGGCGATCGCGCGGATCGATCCGAAGAAATACG
AGGCCGGCGACGTCGGCTCGTTCACGCTGAACGACATCCTGAGCGAGCTGAAGAAGCCGGGCCGCGACCCGCGCGCCACG
TTCGAGCCGCCGAAGTTCCGCGACGACGTGCGGACCATGGAGGATCTCAAGCCGGGCATGGAGCTCGAGGGCGTGGTGAC
CAACGTCACGGCGTTCGGCGCCTTCGTCGACATCGGCGTCCACCAGGACGGCCTCGTGCACGTCTCGCAGCTGGCGGACA
GGTTCGTGAAGGACCCGAACGAGGTCGCGAAGGTGGGCGAGAAGATCAAGGTGCGTGTGCTCGAGATCGACCTCGTGCGC
AAGCGCATCTCGCTCACCGCGAAGAAGGGCGGCGCTCCCGCCGGCGCGCGTCCCCAGGCGGGCGGCCCCTCTGCAGGCGG
CGACGCGCGCGGCCGCAACGATCGCGGCGACGGCCGCCGGCCGGCCCAGGGGCAGCAAGGGAAGGGGCAGGGGAGCTCGT
CGGGCGGCTTCCGCAACAACCCGTTCGCCGATCTGCTCCGGAAGTGA

Protein sequence :
MTETQSPVAVPSRADSSFDPVPLLAEELSLPRQGVSAVAKLLAEGATVPFIARYRKEATGGLDEVQIRAIEERRAYLIEL
EERRATVLTEIQKQGKLTDALASKIRACSTKAELEDLYLPFKPKRRTRAIIAKERGLEPLADRMWSQPGDGSPEEEARAF
VSAEKEVPDAAAALAGARDICAERIAEHADVRKLVREAYAKEGVIKVQKNEEHAAKQTKFDMYGSFEEPVANIPSHRYLA
IRRGEAEGVLRASIELAPEPLVPPIHAAVGLKPKSPWAGELTKAADDAVKRLLLPAVQSDVRVDLKMQADRAAVDVFAQN
LRELLLAAPFGTQAVLGIDPGQRTGCKCAVVDETGKLLEHTTIYLVGSSDSLERARQDLRRICRKYPLRAVAVGNGTHGR
ETEAFVKDVLASEGLKELFCVPVSEAGASVYSASEVAREEFPDLDLTVRGAISIARRLQDPLAELVKVDPKSIGVGQYQH
DVYQGLLARKLDEVVESCVNLVGVELNTASAPLLARVAGIGPSLAKKIVAHRDLNGAFKSRKALLDVPGVGPRTFEQAAG
FVRVRGGEHPLDASAVHPERYGLVERIAADLGVPVGSLIGDTAAIARIDPKKYEAGDVGSFTLNDILSELKKPGRDPRAT
FEPPKFRDDVRTMEDLKPGMELEGVVTNVTAFGAFVDIGVHQDGLVHVSQLADRFVKDPNEVAKVGEKIKVRVLEIDLVR
KRISLTAKKGGAPAGARPQAGGPSAGGDARGRNDRGDGRRPAQGQQGKGQGSSSGGFRNNPFADLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 7e-156 50