Gene Information

Name : galE3 (sce3760)
Accession : YP_001614400.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.2
Position : 5241186 - 5242232 bp
Length : 1047 bp
Strand : +
Note : High confidence in function and specificity

DNA sequence : 
ATGTCCACGCCTCGCTACTTGATCACCGGCGGTGCCGGGTTCATCGGAAGCAACCTCGTCGCGGCGCTGACCGCCGCCGG
CGAGCGGGTCCGCGTCCTCGACAACCTCGCGACTGGCCGATGGGAGAACCTCGACGGGCTCCCCCACCAGTCGCTGATCG
AGCGCATCACTGGGGACATCCGGGACGCGGCGGCGGTCGCGACGGCGGCCAAGGGGGTCGAGGTCATCCTCCACCAGGCC
GCGCTCGGCTCGGTCCCGCGCAGCGTCGAGTCGCCCATCGAGTCGAACTCCGTCAACGTCGGCGGCACGGTCACGGTGCT
CGACGTGGCGCGCCGCCAGGGCGTGCGCCGGGTGCTCTTCGCCGCGTCGTCCAGCGCGTACGGCGAGACGCCCGTCCTCC
CGAAGCACGAGGGCATGGAGCCGATGCCGCTGTCGCCGTACGCGGTCACGAAGCTCGCCTGCGAGCACTACATGAAGGTC
TTCGCGGGCATCTACGGCATCGAGACCCTGAGCCTGCGTTACTTCAACGTCTTCGGGCCGAACCAGACGCCGGACGGCGC
CTACGCCGCGGCGATCCCGCGGTTCGTCGACGCCGCCCTGCAGAACCGGCCGATCCCGATCTTCGGCGACGGCGAGCAGA
CGCGCGACTTCTGCTTCATCGAGAACACCGTCCTCGCGAACCTCCTCGGCGCGACGTCGTCGAAGAAGTTCAAGGGTGAG
GTCATCAACATCGCCGGCGGACGCAGGATCGGGCTGAATGAGCTCTGCAAGGAGATCTCGCGGGCCCTCGGGCGGGACGT
CGCCGTCGAGCACCTCCCCGCCCGCGCCGGGGACATCCGCCACTCGCTCGCCGACATCTCGCGCGCGGCCGAGCTCATCG
GGTACGAGCCCCGCGTACGCTGGGAGGACGGCATCGTCCCCACGGTCACGTACCTGCGGACGCTCCGTGAGAAGGGCCCC
GCGGCTGCGTCGGCCACGGTGACCTGTGGCAAGGTTCCGTTGCCCAAGGCCGAAGGGGCCTCGGACAGCGGACAAAAGGC
GAGCTAG

Protein sequence : 
MSTPRYLITGGAGFIGSNLVAALTAAGERVRVLDNLATGRWENLDGLPHQSLIERITGDIRDAAAVATAAKGVEVILHQA
ALGSVPRSVESPIESNSVNVGGTVTVLDVARRQGVRRVLFAASSSAYGETPVLPKHEGMEPMPLSPYAVTKLACEHYMKV
FAGIYGIETLSLRYFNVFGPNQTPDGAYAAAIPRFVDAALQNRPIPIFGDGEQTRDFCFIENTVLANLLGATSSKKFKGE
VINIAGGRRIGLNELCKEISRALGRDVAVEHLPARAGDIRHSLADISRAAELIGYEPRVRWEDGIVPTVTYLRTLREKGP
AAASATVTCGKVPLPKAEGASDSGQKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-48 46
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-48 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galE3 YP_001614400.1 UDP-glucose 4-epimerase VFG0430 Protein 7e-49 46