|
Name : sce2049 (sce2049) Accession : YP_001612688.1 Strain : Sorangium cellulosum So ce 56 Genome accession: NC_010162 Putative virulence/resistance : Virulence Product : two-component system response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2779476 - 2780162 bp Length : 687 bp Strand : + Note : Family membership DNA sequence : ATGGCGCTGCGGCTCCTGCTCATCGACGACGACACCCGGCTCCACGCCTTGCTCGCGAGCTACCTCGAGCAGAACGGGTT CGCGGTGACCGTCGCGTGCGACGGCGCGCGCGGCCTCTTGGCGCTCGCCGCGGGCACCTTCGACGCCGTCCTGCTCGACG TGATGATGCCGGGCATGGACGGCATCGAGGTCGTCCGCCGCATCCGGCAGAAGAGCTCGATGCCGATCCTCATGCTCACC GCCCGCGGCGACGAGGCCGATCGCGTGGTCGGCCTCGAGATCGGCGCCGACGACTACATCGCGAAGCCCTTCAGCCCGCG CGAGCTGCTCGCGCGCCTCCGCGCGGTGCTCCGGCGGGCCACGCCCGACGCCGCCGGCGAGCGGATCGTGGCCGGCGACA TCGCCATCGACGTGCCCGGCCGCGTCGTCACCGTGTCGGGCAAGCCCACCGATCTCACCGGCATCGAGTTCGACATCCTC GTCGCCCTCGCGCGGCGCGCTGGCCGCGTCGTCGCCCGGGAGGCGCTCCTCGAGGAGGCCGGCCGCGGCGACGTCAACGT CGGCGGGCGGACGGTCGACGTGCACATCTCGCACCTGCGGCAGAAGCTGTCGGACGACCCGAGGTCGCCGAGGCTCATCA AGACGGTGCGCGGCGTCGGCTACGTGCTCGCCAAGGACCGCGTGTGA Protein sequence : MALRLLLIDDDTRLHALLASYLEQNGFAVTVACDGARGLLALAAGTFDAVLLDVMMPGMDGIEVVRRIRQKSSMPILMLT ARGDEADRVVGLEIGADDYIAKPFSPRELLARLRAVLRRATPDAAGERIVAGDIAIDVPGRVVTVSGKPTDLTGIEFDIL VALARRAGRVVAREALLEEAGRGDVNVGGRTVDVHISHLRQKLSDDPRSPRLIKTVRGVGYVLAKDRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 3e-19 | 43 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 1e-18 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP000675.2.gene1535. | Protein | 3e-31 | 48 |
| sce2049 | YP_001612688.1 | two-component system response regulator | AE000516.2.gene3505. | Protein | 8e-25 | 48 |
| sce2049 | YP_001612688.1 | two-component system response regulator | BAC0125 | Protein | 3e-23 | 46 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_012469.1.7685629. | Protein | 4e-20 | 46 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_002952.2859905.p0 | Protein | 1e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_009641.5332272.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_013450.8614421.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_007793.3914279.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_002745.1124361.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_009782.5559369.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_002951.3237708.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_007622.3794472.p0 | Protein | 1e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_002758.1121668.p0 | Protein | 2e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_003923.1003749.p0 | Protein | 1e-25 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | AE016830.1.gene1681. | Protein | 2e-27 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_002695.1.915041.p | Protein | 3e-20 | 44 |
| sce2049 | YP_001612688.1 | two-component system response regulator | BAC0533 | Protein | 3e-20 | 44 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP001138.1.gene4273. | Protein | 5e-20 | 44 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP000034.1.gene3834. | Protein | 3e-20 | 44 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP000647.1.gene4257. | Protein | 3e-20 | 44 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP000034.1.gene3671. | Protein | 8e-28 | 43 |
| sce2049 | YP_001612688.1 | two-component system response regulator | BAC0197 | Protein | 2e-17 | 43 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP001918.1.gene5135. | Protein | 5e-19 | 43 |
| sce2049 | YP_001612688.1 | two-component system response regulator | FJ349556.1.orf0.gene | Protein | 2e-26 | 42 |
| sce2049 | YP_001612688.1 | two-component system response regulator | AF155139.2.orf0.gene | Protein | 3e-26 | 42 |
| sce2049 | YP_001612688.1 | two-component system response regulator | HE999704.1.gene2815. | Protein | 2e-23 | 42 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP000034.1.gene2186. | Protein | 4e-19 | 42 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_002695.1.916589.p | Protein | 4e-19 | 42 |
| sce2049 | YP_001612688.1 | two-component system response regulator | BAC0039 | Protein | 4e-19 | 42 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP004022.1.gene3215. | Protein | 2e-22 | 41 |
| sce2049 | YP_001612688.1 | two-component system response regulator | NC_012469.1.7686381. | Protein | 2e-23 | 41 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP001138.1.gene2239. | Protein | 6e-19 | 41 |
| sce2049 | YP_001612688.1 | two-component system response regulator | CP001918.1.gene3444. | Protein | 4e-18 | 41 |
| sce2049 | YP_001612688.1 | two-component system response regulator | BAC0596 | Protein | 6e-19 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sce2049 | YP_001612688.1 | two-component system response regulator | VFG1390 | Protein | 8e-21 | 45 |
| sce2049 | YP_001612688.1 | two-component system response regulator | VFG1389 | Protein | 1e-18 | 44 |
| sce2049 | YP_001612688.1 | two-component system response regulator | VFG0596 | Protein | 1e-19 | 43 |
