Name : sce1865 (sce1865) Accession : YP_001612503.1 Strain : Sorangium cellulosum So ce 56 Genome accession: NC_010162 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 2534086 - 2534940 bp Length : 855 bp Strand : + Note : High confidence in function and specificity DNA sequence : GTGACGCAGGCGGCAATCGATGGGGCGCTGGCAGCCGCGGGCGAGCGCGCCGCCCTGGCGAATCGCGCGGGCGGCGCCAT CGAGCTCACCGAGGTATCGGTGCGGTTCGGCAAGGCCGGGCGCGAGGTCACGGCGCTCCAGCGCGTGAGCCTCACGATCG CGCCGGGGCAGTTCGTGGCCGTGCTCGGGCCGTCCGGCTGCGGCAAATCGACGCTGCTGAACGTGATCGCCGGGTTCGAA CGACCACGGGCGGGCTCCGTGCGGGTCGACGGCGAGCTCGTGACCGAGCCCAGCCCGCGCCGCCCGGTGGTGTTCCAGCA GCACTCGCTGTTTCCGTGGATGACGGCGCTCGACAACGTCGCCTTTGGCCTCAGGATGGCCGGCGACGCGGCGGCGCGCG AGCGCGCGCGGCACTACCTGGCGCTCGTGGGCCTGTCGGATTTCGCCGAGCATTACCCGGAGCAGCTGTCGGGTGGCATG CAGCAGCGCGTGGGTATCGCGCGGGCGCTCGCCGTGGAGCCCGCCATCTTGCTGATGGACGAGCCGTTCGGCGCGCTGGA CGCGCAAACACGCGCGTTGATGCAGGAGCAGCTGCTCGGCCTCTGGGAGCGCTGGCGTCACACCGTGGTGTTCGTGACCC ACGACATCGACGAGGCGATCTTCCTCGCCGATCGCGTGGTGGTGCTGGGGGTCAAGCCGAGCGGCCTCAGGCGGATCGTC GACGTCGACGTGCCGCGGCCGCGGAGCCCGCGCGCGCGGCTCGATCCGACCTACCAGGCGTTGTATCAAGAGCTCTTCGG GCTGATCCGGGAGGAGAGCTCGAAGACGTTCGATGGCTCGAGGGCTGCGTCATGA Protein sequence : MTQAAIDGALAAAGERAALANRAGGAIELTEVSVRFGKAGREVTALQRVSLTIAPGQFVAVLGPSGCGKSTLLNVIAGFE RPRAGSVRVDGELVTEPSPRRPVVFQQHSLFPWMTALDNVAFGLRMAGDAAARERARHYLALVGLSDFAEHYPEQLSGGM QQRVGIARALAVEPAILLMDEPFGALDAQTRALMQEQLLGLWERWRHTVVFVTHDIDEAIFLADRVVVLGVKPSGLRRIV DVDVPRPRSPRARLDPTYQALYQELFGLIREESSKTFDGSRAAS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 3e-44 | 50 |
opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-30 | 47 |
opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-31 | 47 |
CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-28 | 41 |
CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-28 | 41 |
cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 4e-28 | 41 |