Gene Information

Name : sce1865 (sce1865)
Accession : YP_001612503.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2534086 - 2534940 bp
Length : 855 bp
Strand : +
Note : High confidence in function and specificity

DNA sequence :
GTGACGCAGGCGGCAATCGATGGGGCGCTGGCAGCCGCGGGCGAGCGCGCCGCCCTGGCGAATCGCGCGGGCGGCGCCAT
CGAGCTCACCGAGGTATCGGTGCGGTTCGGCAAGGCCGGGCGCGAGGTCACGGCGCTCCAGCGCGTGAGCCTCACGATCG
CGCCGGGGCAGTTCGTGGCCGTGCTCGGGCCGTCCGGCTGCGGCAAATCGACGCTGCTGAACGTGATCGCCGGGTTCGAA
CGACCACGGGCGGGCTCCGTGCGGGTCGACGGCGAGCTCGTGACCGAGCCCAGCCCGCGCCGCCCGGTGGTGTTCCAGCA
GCACTCGCTGTTTCCGTGGATGACGGCGCTCGACAACGTCGCCTTTGGCCTCAGGATGGCCGGCGACGCGGCGGCGCGCG
AGCGCGCGCGGCACTACCTGGCGCTCGTGGGCCTGTCGGATTTCGCCGAGCATTACCCGGAGCAGCTGTCGGGTGGCATG
CAGCAGCGCGTGGGTATCGCGCGGGCGCTCGCCGTGGAGCCCGCCATCTTGCTGATGGACGAGCCGTTCGGCGCGCTGGA
CGCGCAAACACGCGCGTTGATGCAGGAGCAGCTGCTCGGCCTCTGGGAGCGCTGGCGTCACACCGTGGTGTTCGTGACCC
ACGACATCGACGAGGCGATCTTCCTCGCCGATCGCGTGGTGGTGCTGGGGGTCAAGCCGAGCGGCCTCAGGCGGATCGTC
GACGTCGACGTGCCGCGGCCGCGGAGCCCGCGCGCGCGGCTCGATCCGACCTACCAGGCGTTGTATCAAGAGCTCTTCGG
GCTGATCCGGGAGGAGAGCTCGAAGACGTTCGATGGCTCGAGGGCTGCGTCATGA

Protein sequence :
MTQAAIDGALAAAGERAALANRAGGAIELTEVSVRFGKAGREVTALQRVSLTIAPGQFVAVLGPSGCGKSTLLNVIAGFE
RPRAGSVRVDGELVTEPSPRRPVVFQQHSLFPWMTALDNVAFGLRMAGDAAARERARHYLALVGLSDFAEHYPEQLSGGM
QQRVGIARALAVEPAILLMDEPFGALDAQTRALMQEQLLGLWERWRHTVVFVTHDIDEAIFLADRVVVLGVKPSGLRRIV
DVDVPRPRSPRARLDPTYQALYQELFGLIREESSKTFDGSRAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-44 50
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-30 47
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-31 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41