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Name : kdpE (sce1356) Accession : YP_001611994.1 Strain : Sorangium cellulosum So ce 56 Genome accession: NC_010162 Putative virulence/resistance : Unknown Product : two component system transcriptional regulatory protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1871509 - 1872213 bp Length : 705 bp Strand : + Note : High confidence in function and specificity DNA sequence : ATGTCGGACGCGTCCCCCCTCGTGCTGCTGATCGAGGACGAGCCGCAGATGCGCCGGTTCCTGCGCGCGATGCTGGCGGC CCGCGGCTACCGGCTCGTGGAGGCGGAGACGGGCAGCGACGGGATCGCCCAGGCGACGACGCGCAATCCGGATCTCGTGC TCCTCGATCTGGGGCTGCCGGACATGGACGGCCTGGAGGTGACCCGGCGGCTCCGGGAGTGGAGCGCCGTCCCCATCATC GTGCTGTCGGCCCGCGGTCAGGAGCAGGACAAGATCGACGCGCTGGACGGCGGCGCCGACGATTACCTGACCAAGCCCTT CAGCGCCGGCGAGCTTTTGGCGCGGCTGCGCGTGGCCTTACGCCACGCCGCCAGCGCGGCGCGCGGGGCGACGGCGGAGG GCCACCGCTTCGCGGTCCAGGACATCGAGGTCGATCTCGCGCGCCGGGTCGTGCTGCGGGCGGGCGAGGAGGTCCACCTG ACCCCCATCGAGTACAAGCTGCTCACGACGCTGATACGGCACGCGGGCAAGGTCCTCACCCATCGCCAGCTCCTCGGCGA GGTGTGGGGGCCTGCCTACGCGGGGCAGGCGCACTACCTGCGCGTCTACATGGCGCAGCTCCGGCACAAGCTGGAGCGCG ATCCGGCGCGCCCGCTGATCCTGATCACGGAGCCGGGCGTGGGCTACCGGCTCAAGGGCCCTTGA Protein sequence : MSDASPLVLLIEDEPQMRRFLRAMLAARGYRLVEAETGSDGIAQATTRNPDLVLLDLGLPDMDGLEVTRRLREWSAVPII VLSARGQEQDKIDALDGGADDYLTKPFSAGELLARLRVALRHAASAARGATAEGHRFAVQDIEVDLARRVVLRAGEEVHL TPIEYKLLTTLIRHAGKVLTHRQLLGEVWGPAYAGQAHYLRVYMAQLRHKLERDPARPLILITEPGVGYRLKGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 6e-29 | 44 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 8e-29 | 44 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 2e-20 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 3e-20 | 42 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 3e-20 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 3e-20 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 3e-20 | 42 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-20 | 42 |
