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Name : kdpB (sce1353) Accession : YP_001611991.1 Strain : Sorangium cellulosum So ce 56 Genome accession: NC_010162 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 1865962 - 1868154 bp Length : 2193 bp Strand : + Note : High confidence in function and specificity DNA sequence : ATGACCATGCACCTTCACACGACCGGGATCGCCAGGGCCAAGCCCGGGGCCCCCGCGCCCCCGCCCCCCGAGCTGTCGCC GCCGCCGAGGCCGCGCCACCCGTCCCGCGACGTGGAGGGGAAGAAGACCGCGGCGAGGCCGCTCTTCGACCCGGCGATCG TCAAGCCGGCGATCGTCGCGGCGTTCCGCAAGCTCGACCCGCGCCACCAGGCGCGCAACCCGGTGATGTTCGTTGTCCTC GCCGGGAGCGCGCTCACCACGGCCCTGTTCGTGCACGCGCTCTTGAGCGAGCGCGAGGGCGAGGAGCCGGCCGGGTTCAT CCTCGCCGTCTCCCTCTGGCTCTGGTTCACCGTGCTCTTCGCGAACTTCGCGGAGGCCGTGGCCGAGGGGCGCGGCAAGG CGCAGGCCGACACGCTCCGCAAGGCGCGGCGCGACGTCGAGGCCGTGAAGCTCGCCCGCCCGGAGCGCGACGCGGAGCGG GTCGCCGTGCCCGCGTCGAGCCTCCGGAGGGGAGACCTCGTGCTCGTCGAGGCGGGCGCGATCATCCCCGGTGACGGCGA TGTCGTCGTCGGCGTCGCGTCCGTCGACGAGAGCGCCGTCACGGGCGAGAGCGCCCCGGTGGTGCGGGAGAGCGGCGGCG ACCGGAGCGCCGTCACGGGCGGGACGCGCGTCCTGTCCGACTGGCTCGTCCTCCGCATCTCCGCGAACCCCGGCGAGGCG TTCCTCGACCGGATGATCTCGATGGTCGAAGGGGCGAAGCGCAAGAAGACGCCGAACGAGATCGCGCTCGACATCCTGCT CGCCGCGCTCACGATCGTGTTCCTCCTCGCGACCGTGACGCTGCTGCCGTACTCGGTCTTCAGCGTGCGGGCGGCAGGGC AGGGGACCCCGATCAGCATCACCGTGCTCACGGCGCTGCTCGTGTGCCTGATCCCGACGACGATCGGCGGGCTCCTCTCG GCGATCGGCATCGCCGGGATGGACCGCATGATCCAGGCGAACGTCATCGCCATGTCGGGCCGCGCCGTCGAGGCCGCCGG CGACGTGGACGTGCTGCTGCTCGACAAGACCGGCACGATCACGCTCGGCAACCGGCAGGCGACGGCGCTCCTCCCGACGG ACGGGGTCGAGGCCAGGGCGCTCGCCGACGCCGCGCAGCTCGCGTCGCTCGCCGACGAGACCCCCGAGGGGCGCAGCGTC GTCGTGCTCGCCAAGGAGAAGTACGGCCTGCGCGAGCGCGATCTCTCGGCCCTCGGCGCCCGCTTCGTCCCCTTCTCCGC GCAGACCCGGATGAGCGGCGTCGACAGCGGCGCGCGCGAGATCCGGAAGGGCGCCTTCGATGCGATCGAGGCCTACGTCA AGGAGAAGGGCGGAGCGGTCCCGTCCGCGGTGCGGGCGGCGACGGAGGCCATCGCCCGGAAGGGCGGCACGCCGCTCGTG GTCGCCGAGGGCGGCGAGGTGCTGGGCGTCATCCACCTCAAGGACATCGTGAAGGGCGGCATCAAGGAGCGCTTCGGCGA CCTCCGGCGCATGGGGATCAAGACGGTGATGATCACGGGCGACAACCCGCTCACCGCCGCGGCCATCGCCGCCGAGGCCG GCGTCGACGATTTCCTGGCGCAGGCCACGCCCGAGGCGAAGCTGAAGATGATCCGCGATTACCAGGCGGGCGGCCGGCTC GTCGCCATGACCGGCGACGGGACGAACGACGCCCCCGCGCTGGCGCAGGCGGACGTCGCGGTCGCCATGAACACGGGCAC CCAGGCCGCGAAGGAGGCCGGGAACATGGTCGACCTCGACTCCAACCCGACCAAGCTCATCGAGATCGTCGAGATCGGCA AGCAGCTCCTGATGACGCGGGGCGCGCTCACGACCTTCAGCCTGGCGAACGACGTCGCGAAGTACTTCGCCATCATCCCG GCGGCCTTCGTCTCGACGTACCCTGCGCTCGGGCGGCTCAACGTGATGGGGCTCGCCACGCCGCGGAGCGCCGTGCTCTC CGCGGTGATCTTCAACGCGCTGATCATCGTCGCGCTCATCCCGCTCGCGCTCCGGGGCATCCGCTACCGATCCGTCGGCG CGGAGCGGATGCTCCGCAGGAACCTGCTCGTCTACGGCGCCGGCGGGCTCATCGTGCCGTTCGTGGGGATCAAAGGGATC GATCTCCTCCTCTCCGCCCTCGGCCTCGTCTGA Protein sequence : MTMHLHTTGIARAKPGAPAPPPPELSPPPRPRHPSRDVEGKKTAARPLFDPAIVKPAIVAAFRKLDPRHQARNPVMFVVL AGSALTTALFVHALLSEREGEEPAGFILAVSLWLWFTVLFANFAEAVAEGRGKAQADTLRKARRDVEAVKLARPERDAER VAVPASSLRRGDLVLVEAGAIIPGDGDVVVGVASVDESAVTGESAPVVRESGGDRSAVTGGTRVLSDWLVLRISANPGEA FLDRMISMVEGAKRKKTPNEIALDILLAALTIVFLLATVTLLPYSVFSVRAAGQGTPISITVLTALLVCLIPTTIGGLLS AIGIAGMDRMIQANVIAMSGRAVEAAGDVDVLLLDKTGTITLGNRQATALLPTDGVEARALADAAQLASLADETPEGRSV VVLAKEKYGLRERDLSALGARFVPFSAQTRMSGVDSGAREIRKGAFDAIEAYVKEKGGAVPSAVRAATEAIARKGGTPLV VAEGGEVLGVIHLKDIVKGGIKERFGDLRRMGIKTVMITGDNPLTAAAIAAEAGVDDFLAQATPEAKLKMIRDYQAGGRL VAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQLLMTRGALTTFSLANDVAKYFAIIP AAFVSTYPALGRLNVMGLATPRSAVLSAVIFNALIIVALIPLALRGIRYRSVGAERMLRRNLLVYGAGGLIVPFVGIKGI DLLLSALGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-161 | 63 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-161 | 63 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 7e-121 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 7e-121 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 7e-121 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 7e-121 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-122 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 5e-121 | 55 |
