Gene Information

Name : sce1251 (sce1251)
Accession : YP_001611888.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1731553 - 1733118 bp
Length : 1566 bp
Strand : -
Note : -

DNA sequence :
ATGCCGCGCGCCCCGCCCGGGCGGGGCGGGGCGCGCGGGCGCCGGCGTGTCCGTCGCTTCCAGCCGGCGAGCGACCGTGG
TAAATTTCTGGACATGCAAGCGGGGCAGCACGAAGAGCCGGTGATGGGGAGCAATGGCTCTCTCCTTGCGGAGCTCCTGG
CGGAGACGGGGGTCGCCTCCACGAGCGGCGCCTACCACGATGTGAAGCGGGGCGTGGAGGCGGTGGTCGGCAAGGTCGCG
GGCCGCCCGGAGGCCGGCGCGGCGCTGGACAGCGCCCTCATCGACCTGTGGATCGCGGAGATCGACCAGCGGCTGTCGCG
GCAGATCGACGAGATCCTGCATCACCCCGTGTTCCAGCGCCTCGAGGCCGCGTGGCGCGGCCTGAAGTTCGCCATCGATC
ACATCGACTTCCGGGAGAACATCCGCGTCGAGATCCTCAACTGCTCGAAGGACGATCTGCTCGCGGATTTCGAGGACTCG
TCCGAGGTCGTGAGGAGCGGCCTCTACAAGATCGTCTATTCGTCGGAGTTCGGCAATTTCGGCGGCAAGCCGTTCGGCGC
CGTCATCTCGAACTACGAGTTCGGCCCCGTGCCCCAGGACATCGCGCTCCTCCAGAAATGCGCGGCGGTGGCGACGATGG
CGCACGCGCCCTTCCTGGCCGTCGCGGGCCCGCAGTTCTTCGGGCTCAAGGACTACCGGAAGGTGCCGCACCTCGGCGAC
ATCAAGGCGCTGTTCGAGGGGCCGCAGTACGTGAAGTACACAGCGTTCCGCGAGTCCGAGGACGCGCGCTACGTCGGCCT
GCTCCTCCCCCGCTTCCTCCTGCGGCTGCCCTACGGGGCGAGCACCTCCCCCATCCGGGCGTTCTCCTACGAGGAAGACG
TCGTCGGCAACCACGCGGCGTACTGCTGGGGGGCGCCCACCTACGCGATGGCGACCCGGCTCGCCGAGAGCTTCGCGCGC
CACCGCTGGTGCCTGCACATCATCGGGCCGCAATCCGGCGGCACCGTCGAGGGCCTCACGCTCCACGAGTACGATGCGCT
CGGCGCCATCCAGACGAAGATCCCGACCGAGATCATGCTGACCGAGCGCCGCGAGTTCGAGCTCAGCGAGGAGGGCTTCA
TCGGGCTCACGTTCCGCAAGGACACGGACAACGCCTGCTTCTTCTCCGCGAACTCGGCGCAAAAACCCAAGTACTTCGGC
CAGAGCGACGAGGGGCGCGCCGCCGAGGTCAACTACCGGCTCGGCACACAGCTGCCTTATGTCTTCCTCGTCAGCCGGCT
CGCCCACTACCTCAAGGTCATGCAGCGCGAGCAGATCGGCACCTGGAAGGAGCGCGGCGACCTCGAGCGCGAGCTGAACA
GCTGGCTCAGCCAGTATGTCGCGGACATGGATGTCGTGTCGCCCGCCGTGCGCTCGCGCAGGCCGCTCCGCAAGGGGCGG
ACCTCGGTGACCGAGGTCGAGGGGAGCGCGGGCTGGTACCGGGTCCACCTCGAGGTGCGCCCGCACCTCAAGTACATGGG
GGCCTATTTCACGCTGAGCCTGATGGGCAAGCTCGACCGGGAGTGA

Protein sequence :
MPRAPPGRGGARGRRRVRRFQPASDRGKFLDMQAGQHEEPVMGSNGSLLAELLAETGVASTSGAYHDVKRGVEAVVGKVA
GRPEAGAALDSALIDLWIAEIDQRLSRQIDEILHHPVFQRLEAAWRGLKFAIDHIDFRENIRVEILNCSKDDLLADFEDS
SEVVRSGLYKIVYSSEFGNFGGKPFGAVISNYEFGPVPQDIALLQKCAAVATMAHAPFLAVAGPQFFGLKDYRKVPHLGD
IKALFEGPQYVKYTAFRESEDARYVGLLLPRFLLRLPYGASTSPIRAFSYEEDVVGNHAAYCWGAPTYAMATRLAESFAR
HRWCLHIIGPQSGGTVEGLTLHEYDALGAIQTKIPTEIMLTERREFELSEEGFIGLTFRKDTDNACFFSANSAQKPKYFG
QSDEGRAAEVNYRLGTQLPYVFLVSRLAHYLKVMQREQIGTWKERGDLERELNSWLSQYVADMDVVSPAVRSRRPLRKGR
TSVTEVEGSAGWYRVHLEVRPHLKYMGAYFTLSLMGKLDRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-127 52
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-127 52
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 6e-125 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sce1251 YP_001611888.1 hypothetical protein VFG2475 Protein 2e-146 57
sce1251 YP_001611888.1 hypothetical protein VFG2093 Protein 2e-139 55