Gene Information

Name : sitD (Btr_0091)
Accession : YP_001608580.1
Strain : Bartonella tribocorum CIP 105476
Genome accession: NC_010161
Putative virulence/resistance : Virulence
Product : Iron transport protein, inner membrane component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 118933 - 119838 bp
Length : 906 bp
Strand : -
Note : inner-membrane protein (permease component) of an iron transport system,InterPro: ABC transporter family 3; hypothetical protein

DNA sequence : 
ATGATTGATCAATTGCTCCTTCCTTTCCAGTTTTCTTTTATGCTGAAAGGCATGCTTATTGTTACGATCCTTTCTATTCC
AATGGCAATGCTTTCCTGTTTTCTTATTTTGAAAGGATGGGCACTGTTAGGTGATGCCATTTCCCATGCAGTTTTTCCAG
GTGTTGTTGTTGGTTATATGACAACACCGTGGGTGATAGCACTTTTAACTTCTTTGCCATTTGCTTGGCTCCAGCATATG
CGCCCAGAGAATATTACAATGACTTTGATTACTTGTGGTGCTTTTGTTGCGGGTATGGTTTGTGCACTTACAACAGGTTT
TTTGGGAAGTAACAGTCGTATCAAACAGGATACAGTGATGGGTGTTGTCTTTTCATCGATGTTTGGTTTAGGGCTTGTTT
TGGCAACATCTATCTATAGTAGCTTAGACTTAAATCATATTCTATTTGGTAACCTGTTGGGCGTTAATTGGCTTGATATT
ACGCAGACAGCGGTCATTTCTGCCATTGTTACTTTCATTTTAGGGGCAAAATGGCGCGATTTTATGCTGTATATTTTTGA
TTCAGTACAAGGTCGTGCAATGGGATTGCGAATACCACTGCTCCACTATACCCTTCTCACAATGATTTCTCTTACAATTG
TTGCAGCTTTGAAAGCGGTTGGAATTGTGCTTGTTATTTCTTTACTGATAGCACCAGGAGCAATTGCCTATCTTGTCACA
AAACGGTTTTCTTTTATGTTAATGATCGCGATACTTATTGCAGCTTTTTCTGGTTTTTTAGGAATTTATCTTAGCCTATT
TATCGGCTCTGATTCTGCTTCCACAATTGTGTTAATCTTGACGTTGATTTTTATTGCCATTTTCATGATAACTTTCTTTC
GTCAAAATACAGTTCAAGAAACTTGA

Protein sequence : 
MIDQLLLPFQFSFMLKGMLIVTILSIPMAMLSCFLILKGWALLGDAISHAVFPGVVVGYMTTPWVIALLTSLPFAWLQHM
RPENITMTLITCGAFVAGMVCALTTGFLGSNSRIKQDTVMGVVFSSMFGLGLVLATSIYSSLDLNHILFGNLLGVNWLDI
TQTAVISAIVTFILGAKWRDFMLYIFDSVQGRAMGLRIPLLHYTLLTMISLTIVAALKAVGIVLVISLLIAPGAIAYLVT
KRFSFMLMIAILIAAFSGFLGIYLSLFIGSDSASTIVLILTLIFIAIFMITFFRQNTVQET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-63 50
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-63 50
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-63 50
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-62 50
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-62 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitD YP_001608580.1 Iron transport protein, inner membrane component BAC0352 Protein 7e-63 50
sitD YP_001608580.1 Iron transport protein, inner membrane component BAC0442 Protein 2e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitD YP_001608580.1 Iron transport protein, inner membrane component VFG0528 Protein 7e-63 50