Gene Information

Name : trwI1 (Btr_2521)
Accession : YP_001610478.1
Strain : Bartonella tribocorum CIP 105476
Genome accession: NC_010161
Putative virulence/resistance : Virulence
Product : TrwI1 protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3704
EC number : -
Position : 2449233 - 2450078 bp
Length : 846 bp
Strand : +
Note : Component of type IV secretion system; hypothetical protein

DNA sequence : 
ATGAACTTCACTATGTTCGCGCAACTTTCCAATCAAATTAATCAGATAACACAAACATATGTCACGGGTATTTCCTCAAA
AGCGATTGCTACAATTACACCTTTCGTTTCAATTGGAATCACCATCGCTTTCATCATCTATGGATGGCTCATCATTCGGG
GCGCTATCGATATGCCACTCTCCGGATTCGTAAACCGTTTCCTGCGAATAAGCATTATTACTTCAATAGCTCTCACCTCA
GGACTTTATCAAAGTGAAATTGCAAATTTGATAACGCAAATGCCCTATGAGTTCTCAAAAGCGCTCATAGCAAATCCACT
CACTGATACACAATTAATGAATTTACTTGACAAAGCAGCAACCAAAGGATTCCAATATGCAGGTCGTCTTTTCCAGGAAA
CCGTCTTCTTCGAGGCCAATGGATTGCTTTACAGCCTCTTAGGTATCCTTATCTTGCTGGCAACAAGTTCCGTCGTGGCA
ATCGGCGGTGGTCTCGTTATACTGACAAAAATCGCCATTACACTGCTCGTAGGATTGGGCCCTATCTTCATCATTGCTTT
GCTCTGGCAACCAACCTATCGCTTTTTTCAGCAATGGTTAATCCAAGTCGTAAATTATGTAATCCTCTTTCTACTCTTAG
CGACTGTCTTTAATCTGATGATGAATATCTTTGCAAACTATTTGAGTGATATGAAACTCGATTACAACCAGAATGTAGCA
GCCATGTTTGGGGGAGCGCTCATCTTGTCCATTATATCCATCATGCTGTTACTCAAACTATCAAGCATGGCCCATTCTCT
CGCAAAAGGCATAGCATTTGGACATCTATGGAGACATAGAAACTAG

Protein sequence : 
MNFTMFAQLSNQINQITQTYVTGISSKAIATITPFVSIGITIAFIIYGWLIIRGAIDMPLSGFVNRFLRISIITSIALTS
GLYQSEIANLITQMPYEFSKALIANPLTDTQLMNLLDKAATKGFQYAGRLFQETVFFEANGLLYSLLGILILLATSSVVA
IGGGLVILTKIAITLLVGLGPIFIIALLWQPTYRFFQQWLIQVVNYVILFLLLATVFNLMMNIFANYLSDMKLDYNQNVA
AMFGGALILSIISIMLLLKLSSMAHSLAKGIAFGHLWRHRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwI1 CAD42846.1 TrwI1 protein Not tested trw-PAI Protein 3e-109 100
trwI1 YP_001610478.1 TrwI1 protein Virulence Not named Protein 4e-109 100
trwI2 CAD42849.1 TrwI2 protein Not tested trw-PAI Protein 9e-107 98
trwI5 CAD42857.1 TrwI5 protein Not tested trw-PAI Protein 9e-107 98
trwI4 CAD42854.1 TrwI4 protein Not tested trw-PAI Protein 7e-107 98
trwI3 YP_001610484.1 TrwI3 protein Virulence Not named Protein 3e-106 98
trwI2 YP_001610481.1 TrwI2 protein Virulence Not named Protein 1e-106 98
trwI5 YP_001610489.1 TrwI5 protein Virulence Not named Protein 1e-106 98
trwI4 YP_001610486.1 TrwI4 protein Virulence Not named Protein 1e-106 98
trwI3 CAD42852.1 TrwI3 protein Not tested trw-PAI Protein 2e-106 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trwI1 YP_001610478.1 TrwI1 protein VFG2264 Protein 3e-75 68
trwI1 YP_001610478.1 TrwI1 protein VFG2261 Protein 2e-75 67