Gene Information

Name : nrdE (Btr_0212)
Accession : YP_001608687.1
Strain : Bartonella tribocorum CIP 105476
Genome accession: NC_010161
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 270808 - 272958 bp
Length : 2151 bp
Strand : +
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
TTGGAAACAATTGGGATAGAAAAGTCGCAGAAATCCGATCAGATTACGGATTATCATGCGCTGAATGCAATGCTTAATCT
TTATGATGAAAATGGTCATATCCAATTTGATATGGATCGGCTTGCTGCACGGCAATATTTTCTTCAGCATGTTAATCAAA
ATACAGTTTTTTTTCATAATCTGAAGGAAAAAATAGATTACTTAATAGAGGAAGGCTATTATGAAAAAGCTTTATTTGAG
CTTTATGATTTTTCTTTCATTAAAAAGCTTTTTAAACGCGCTTATGCATTTAAATTTCGTTTTCCTACCTTTCTAGGCGC
ATTTAAATACTATACCAGCTATACGCTAAAGACTTTTGATGGGAAGCGTTATCTTGAACGTTATGAAGATCGTATCTGTC
TGGTGTCCTTATATTTAGCACAAGGGAATAAAGCTCTTGCTGAAAGTTTTGTGGATGAGATTATTACGGGGCGTTTTCAA
CCAGCAACGCCAACATTTTTAAATGCTGGAAAAAAACAACGTGGTGAATTGGTTTCGTGTTTTTTGCTCCGTGTTGAAGA
TAATATGGAATCGATAGGTCGTGCGGTTAATTCGGCTTTGCAGCTTTCAAAACGCGGTGGAGGTGTGGCACTTTGTTTAA
CAAATTTGCGGGAGGCTGGAGCACCAATTAAGCAAATAGAAAATCAATCATCTGGTGTTTTACCGGTGATGAAACTTTTG
GAAGATTCTTTTTCTTATGCCAATCAGCTTGGGGCACGACAGGGAGCTGGAGCTGTTTATTTGCATGCACATCATTTAGA
TATTATGAAGTTTTTGGATACAAAGCGTGAAAATGCTGATGAAAAAGTTAGAATAAAAACGCTTTCGCTTGGTGTGGTTA
TTCCTGATATTACTTTTGAGCTTGCTCGGAATAATGAGGATATGTATCTCTTCTCGTCTTATGATATTGAGCGTGTGACA
GGCAAACCCTTTAGCGATATTTCTTTAACGGAGCATTATCGCTCTTTTGTTGATAATGCAAAGATTCGTAAGAAGAAAAT
AAGTGCACGCGTTTTTTTTCAGACATTAGCGGAAATTCAATTTGAGTCTGGTTATCCTTATATTTTATTTGAGGACACTG
CTAATCGATCAAATCCGATTGCTGGACGCATAAGTATGAGCAATTTATGTTCAGAAATTTTGCAGGTGAGTGAGGCGAGT
GAACTGGAGACAGATTTAACCTATCGCACGATTGGAAGTGATATATCCTGTAATCTTGGGTCAATGAATATTGCTAAAGC
CATGGAAAGTCCTGATTTCGGACAGACGGTGGAATCTGCTGTTCGCGCTCTTACTGCGGTTTCGGATATGAGTAATATTG
CTTGCGTGCCGTCCATTGCGAAAGGCAATGCTGAAAGTCATGCGATTGGTTTGGGACAGATGAATTTGCATGGGTTTTTA
GCGCGTGAGCAGATCTATTATGGGTCTCCAGAAGCGATTGATTTTACTAATATCTATTTTTATATTGTGACATATCACGC
CATACGGGTTTCCAATTTAATTGCGCGCGAACGACAAGAGATGTTTGCAGGGTTTGAGAAATCAGCTTATGCCGATGGAC
GTTTTTTCGAAAAATATATTGAAAAAGAATGGAAACCGCAATTTGCGCTTGTACAAGAGCTTTTTGCACGGAATAATATT
GTTATCCCAGATCAAAAGGATTGGCAGGAACTCAAGAAACGCGTTATTAAGTATGGGCTTTATAACCGCAATTTGCAGGC
AGTTCCTCCTACGGGATCTATTTCCTATATTAATCATGCCACTTCTTCTATTCATCCAATTGCTTCAAAAATTGAAATTC
GCAAAGAGGGAAAAATTGGGCGCGTTTATTATCCCGCACCTTATATGGATAATACGAATTTGAATTTTTACCAAGATGCT
TATGAGATTGGTCCTGAAAAAATTATAGATACCTATGCTGCTGCAACACAGCATGTTGATCAAGGTCTTTCGTTAACATT
ATTTTTTCCGGATACCGCGACCACACGTGATATTAACCGCGCACAAATTTATGCCTGGAAAAAGGGGATAAAGAGTATTT
ACTACGTGCGGTTGCGACAAGTCGCACTGAGTGGAACAGAAGTTGATGGCTGTGTTTCGTGCAGTTTATAG

Protein sequence :
METIGIEKSQKSDQITDYHALNAMLNLYDENGHIQFDMDRLAARQYFLQHVNQNTVFFHNLKEKIDYLIEEGYYEKALFE
LYDFSFIKKLFKRAYAFKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRICLVSLYLAQGNKALAESFVDEIITGRFQ
PATPTFLNAGKKQRGELVSCFLLRVEDNMESIGRAVNSALQLSKRGGGVALCLTNLREAGAPIKQIENQSSGVLPVMKLL
EDSFSYANQLGARQGAGAVYLHAHHLDIMKFLDTKRENADEKVRIKTLSLGVVIPDITFELARNNEDMYLFSSYDIERVT
GKPFSDISLTEHYRSFVDNAKIRKKKISARVFFQTLAEIQFESGYPYILFEDTANRSNPIAGRISMSNLCSEILQVSEAS
ELETDLTYRTIGSDISCNLGSMNIAKAMESPDFGQTVESAVRALTAVSDMSNIACVPSIAKGNAESHAIGLGQMNLHGFL
AREQIYYGSPEAIDFTNIYFYIVTYHAIRVSNLIARERQEMFAGFEKSAYADGRFFEKYIEKEWKPQFALVQELFARNNI
VIPDQKDWQELKKRVIKYGLYNRNLQAVPPTGSISYINHATSSIHPIASKIEIRKEGKIGRVYYPAPYMDNTNLNFYQDA
YEIGPEKIIDTYAAATQHVDQGLSLTLFFPDTATTRDINRAQIYAWKKGIKSIYYVRLRQVALSGTEVDGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 74