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Name : clpB (Btr_1998) Accession : YP_001610204.1 Strain : Bartonella tribocorum CIP 105476 Genome accession: NC_010161 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, atp-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2107461 - 2110121 bp Length : 2661 bp Strand : - Note : Chaperone clpB (Heat-shock protein F84.1) (P63284 in E. coli),InterPro; AAA ATPase central region; hypothetical protein DNA sequence : GTGGGTGGTTTGAGAGAGCAAAAGGGCCGTGGCGATGACGAAGAAGGGATGCCTAAAGGGTTGCCCCAAGAAAGGAAAAA AATGAACCTGGAAAAATATAGCGAACGCGTGCAGGGGTTTTTACAATCCGCACAAAATAATGCTCTGGCTTCCGATCATC AGCAGTTTATGCCGGAGCATTTCTTGAAAGTCTTGTTAGACGATGCTCAAGGATTGGCGGCGTCGCTTATCCAAAAAGCA GGGGGGGATCTTAAGCTTATTCAAAAGACGCTTAAAGAAGCTCTCGAGGCTTTGCCAAAAGTACAAGGGGGAAATGGACA ACTCTATCTCTCGCAGCCGGTGGCAAAAGTCTTTGCGCTGGCTGAGGAGCTCGCGCAAAAAGCCGGTGATCAATTTGTCA CTGTCGAGCGCATCTTGCAAGCGCTGCTTATGGAAAAATCCGCAAAAACAGCTGATATTCTCACAAAGGCTGGGTTGACT CCGCAAGCCCTTAATCAGGCAATTAATGCACTGCGCAAAGGAAAAACAGCCACAAGCCCCCATGCCGAAGGTCAATATGA TGCCTTGCAAAAATATGCCCGTGATCTCACAAAAGATGCACGCGAAGGAAAACTCGACCCTGTTATTGGGCGGGAAGAAG AAATTCGTCGCGCCATTCAAGTGCTCTCACGGCGAACAAAAAATAATCCCGTGCTGATCGGTGAACCCGGTGTGGGAAAA ACCGCCATTGTGGAAGGGTTGGCACTGCGTATTATCAATGGCGATGTGCCGGAAACTTTGCGTGATAAACAACTTTATGC GCTCGATATGGGCGCGCTTATTGCGGGGGCAAAATATCGCGGGGAATTTGAAGAGCGCCTTAAAGCGGTGTTGGCTGAAG TGCAAGCCGAAAATGGACAAATTATCCTCTTTATTGATGAATTGCACAATCTCGTGGGAGCAGGAAAATCCGATGGTCCT ATGGATGCTTCAAACTTGCTAAAACCTGCTCTGGCTCGTGGTGAACTCCATTGTGTGGGCGCGACTACCCTTGATGAATA TCGAAAATATGTCGAAAAAGATGCTGCTTTGGCACGCCGCTTTCAACCTGTCTTTGTTCCAGAGCCCTCTTTAGAAGATA CCATTTCTATCTTGCGCGGGATTAAAGAAAAATACGAACAACACCACAAAGTGCGTTTGGCCGACAGTGCTTTGATTGCT GCTGCAAAGCTCTCTTCGCGTTATATTACGGATCGGTTCTTGCCGGATAAAGCGATTGATCTTATCGATGAAGCAGCCGC ACGCTTGCGGATGCAGGTTGATTCAAAGCCAGAGGAACTCGATGCCCTTGATCGGCGAATTTTACAGTTAAAAATCGAAC GGGAAGCTTTGAAGACAGATGTCGAGCCAACTGCAAAAGAGCGTTTGAAAAATGTGCAGGAAGAACTCAAAATATTGGAA CAACAGTCTGCGGAAATGACGACGGCTTGGCAGGCTGAAAAACAAAAATTAGGGCATGCGGCCGATTTGAAAAAACAACT CGAAGAAGCACGCAATGCTTTAGCTATTGCTCAACGTGATGGACAATTCCAAAAAGCTGGGGAATTGGCTTATAGTGTTA TTCCGGAACTCGAAAAACAATTAACTTTAGCCGAAAATGATGACCAGCAAAATCATCTCGTTGAAGAAACGGTGACCGCT GAACATGTTGCGCGGATTGTTTCACGCTGGACCGGTATTCCTGTTGATCGGATGCTGGAAGCAGAACGCGAAGCGCTCTT GCGCATGGAAGATGAAATTGCTACCCGTGTTGTGGGACAGGGTGAAGCGGTTCAAGCGGTTGCGCGGGCTGTACGGCGGG CGCGGGCAGGGTTGCAAGATCCCAATCGTCCTCTGGGTTCTTTCATGTTCTTGGGACCTACCGGTGTGGGGAAAACCGAA CTCACCAAAGCTCTGGCAGCGTTTCTTTTTCAAGATCCCAATGCCATGTTGCGTATTGATATGTCGGAATATATGGAAAA ACATGCAGGAGCACGCTTGATCGGAGCACCTCCAGGATATGTTGGATATGAAGAAGGGGGCGTGCTGACAGAGGCTGTAC GAAGAAGACCTTATCAAGTTATTCTCTTTGATGAAATTGAAAAGGCGCATCCGGATATCTTTAATCTGCTGCTGCAAGTG TTGGATGAAGGGCGCTTGACCGATAGTCAAGGAAGAACGGTCGATTTTCGGAACACTTTGTTGATTATGACCTCAAATCT TGGCGCTGAATTTTTAACTGCTTTGCCTGAAGGACAAACGGTGAATCAAGCAAAAGACGATGTCATGAATGTGGTGAAAG CCGCTTTCCGTCCGGAGTTTTTAAACCGTATTGATGAGATTATTCTCTTTGAACGGTTGCAACGCAAAGATATGGAGGCG ATTGTTGATATTCAGATACAGCATTTGCAAAATTTGCTCAATGAACGCAACATAACTTTGCAAATCAAACCAGAAGTACG AGAATTCCTTGCCGATAAAGGTTATGATCCCCTTTATGGGGCACGTCCGCTTAAACGGATTATCCAAAAGGAAATTCAAG ATCCTCTCGCAGAAAAAATCTTGTTTGGAGAAATACAAGATGAGACAACGGTGACAGTGACAAAGCAAGGTGATCGATTG GCGTTTTTACCGGAAACATAA Protein sequence : MGGLREQKGRGDDEEGMPKGLPQERKKMNLEKYSERVQGFLQSAQNNALASDHQQFMPEHFLKVLLDDAQGLAASLIQKA GGDLKLIQKTLKEALEALPKVQGGNGQLYLSQPVAKVFALAEELAQKAGDQFVTVERILQALLMEKSAKTADILTKAGLT PQALNQAINALRKGKTATSPHAEGQYDALQKYARDLTKDAREGKLDPVIGREEEIRRAIQVLSRRTKNNPVLIGEPGVGK TAIVEGLALRIINGDVPETLRDKQLYALDMGALIAGAKYRGEFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGP MDASNLLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVFVPEPSLEDTISILRGIKEKYEQHHKVRLADSALIA AAKLSSRYITDRFLPDKAIDLIDEAAARLRMQVDSKPEELDALDRRILQLKIEREALKTDVEPTAKERLKNVQEELKILE QQSAEMTTAWQAEKQKLGHAADLKKQLEEARNALAIAQRDGQFQKAGELAYSVIPELEKQLTLAENDDQQNHLVEETVTA EHVARIVSRWTGIPVDRMLEAEREALLRMEDEIATRVVGQGEAVQAVARAVRRARAGLQDPNRPLGSFMFLGPTGVGKTE LTKALAAFLFQDPNAMLRIDMSEYMEKHAGARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDIFNLLLQV LDEGRLTDSQGRTVDFRNTLLIMTSNLGAEFLTALPEGQTVNQAKDDVMNVVKAAFRPEFLNRIDEIILFERLQRKDMEA IVDIQIQHLQNLLNERNITLQIKPEVREFLADKGYDPLYGARPLKRIIQKEIQDPLAEKILFGEIQDETTVTVTKQGDRL AFLPET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-90 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 9e-101 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001610204.1 | ATP-dependent Clp protease, atp-binding subunit ClpB | VFG2076 | Protein | 6e-106 | 41 |
| clpB | YP_001610204.1 | ATP-dependent Clp protease, atp-binding subunit ClpB | VFG2084 | Protein | 7e-104 | 41 |
