Gene Information

Name : virD4 (Btr_1701)
Accession : YP_001610010.1
Strain : Bartonella tribocorum CIP 105476
Genome accession: NC_010161
Putative virulence/resistance : Virulence
Product : conjugal transfer coupling protein TraG
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3505
EC number : -
Position : 1811015 - 1812931 bp
Length : 1917 bp
Strand : +
Note : VirD4 family

DNA sequence :
ATGAAATATACCAAGACACAAATGGTCCTTATTTTAATCCCTATTGCTTTAGGTACTTTAACGATATTCCTTGTCCCTCA
TTTTTTGTTGTTGATAACAAATGGACTAAAGAGTAATCAAATTTATTGGACTCTTCGTTCAGAGCCTTTATTAATCTTAG
TACTAACAGCTGCTATTTCATTGTTATACAGTCTCTCTCAAAAACTACACCTACGTAAAACAATTACTTTTGTCTCCGTT
GTCTTTTTTGGAACCATTGCTCTTTACTATGTTGGGAGTGAAATAAAACGCTTAAGTCCCTATGTTGGTCAACAAGGAAT
AACGTGGAGTTATGCGCTTCAATTTATGGATCCTATGGTTGTCTTTGGCATCATCATTGGTACTTTTTTTTCTCTCATTC
AATTCATTACAACCTCTCCACCTAAAAATAAGGTCAAGCGTGCCAAAAAAGAGGTTTTTGGGGGAGCGGCATGGATGGAT
TTAAGAGAAGCAGCAAAAATCTTTCCTGCCGATGGGCAAATTGTTGTGGGGGAAAGATACCGTGTTGATCAAGATAATGT
ATGCAAAATTCCATTTGCACCTGGCAATAAAACAACATGGGGGAAAGGTGGAGCAGTACCTTTGCTAACCTTTAATCTTG
ATTTTGGTTCAACCCATATGATCTTTTTTGCTGGTTCTGGTGGTTATAAAACCACAAGTACAGTAATTCCTACGTGTTTA
ACCTATCCAGGGTCTATTATTTGTCTTGATCCTTCAACAGAAGTTGCCCCAATCGTCAAATTTGCTCGTCAAAAGATGGG
CAATAGAAATGTTATTATTCTTGATCCTAATTCACTTTTAACAAAAAGTTTTAATGTCATCGATTGGCTTTTAGACGACA
GTGTACCCCGCACACAACGTGAAGCAAATATTGTTAGCTTTTCCAAATTGCTTCTCACGGATAAAAAATCAGACAATTCT
TCGGCGGAATATTTCTCGACACAAGCCCATAATCTTTTAACGGCTCTTCTTGCTCATGTGATATTTTCTGATGAATATGA
AGACCATGAGCGCAACTTAAAAACATTGCGTGGAATTCTCTCTCAATCAGAAACAGCTATTATCAATCAATTACGCATGA
TTCAAGAAACAACCCCTTCTCCTTTTATTCGTGAAATGGTGGGTATTTTTACAGAAATGGCAGAACAAACTTTTTCAGGA
GTCTATACAACTGCCTCAAAAGACACCCAATGGCTTTCTTTGTCTAATTACGCAGATCTTGTCTGCGGTGATGATTTTTC
CTCCTCAGATATTGCCAATGGTAATATAGATGTTTTTCTCAATCTCCCCGCCAGCATTTTAAACAGCTATCCAGCGATAG
GACGTGTAATTATTGGTGCCTTTCTCAATGCTATGGTTACAGCAGACGGTAACTATAAAAAGCGTGTTTTATTTGTCTTA
GATGAAGTTGATCTTCTAGGCTATATGAATATTTTAGAAGAAGCTCGTGATCGTGGACGTAAATACGGCACATCCTTAAT
GCTCTTTTATCAATCCACGGGTCAGTTGGTCAATCACTTTGGTGAATCAGGGGCACGTTCATGGTTTGAAAGCTGCTCCT
TTGTCAGTTATGCTGCCATTAAAGACCTCCAAACAGCGAAAGAGATTTCAGAACGCTGTGGTCAAATGACCGTTGAAGTC
ACCGGAGTAAGCAAATCAAGAGGTTTATCTTTAGGAAAGAGCTCTTACAATATCAATTACCAACAAAGAGCTCTCATTTT
ACCCCACGAGGTTATTCAAGAAATGCGTCAAGATGAACAAATTATTCTTATGCAAGGGCAACCTCCCTTGCGATGTGGCC
GTGCCATCTATTTCAGAAGAAAAGAAATGTTAGCTGCTTCTGCAAAAAATCGTTTTGCCCCACAAAAGAAAAACTAG

Protein sequence :
MKYTKTQMVLILIPIALGTLTIFLVPHFLLLITNGLKSNQIYWTLRSEPLLILVLTAAISLLYSLSQKLHLRKTITFVSV
VFFGTIALYYVGSEIKRLSPYVGQQGITWSYALQFMDPMVVFGIIIGTFFSLIQFITTSPPKNKVKRAKKEVFGGAAWMD
LREAAKIFPADGQIVVGERYRVDQDNVCKIPFAPGNKTTWGKGGAVPLLTFNLDFGSTHMIFFAGSGGYKTTSTVIPTCL
TYPGSIICLDPSTEVAPIVKFARQKMGNRNVIILDPNSLLTKSFNVIDWLLDDSVPRTQREANIVSFSKLLLTDKKSDNS
SAEYFSTQAHNLLTALLAHVIFSDEYEDHERNLKTLRGILSQSETAIINQLRMIQETTPSPFIREMVGIFTEMAEQTFSG
VYTTASKDTQWLSLSNYADLVCGDDFSSSDIANGNIDVFLNLPASILNSYPAIGRVIIGAFLNAMVTADGNYKKRVLFVL
DEVDLLGYMNILEEARDRGRKYGTSLMLFYQSTGQLVNHFGESGARSWFESCSFVSYAAIKDLQTAKEISERCGQMTVEV
TGVSKSRGLSLGKSSYNINYQQRALILPHEVIQEMRQDEQIILMQGQPPLRCGRAIYFRRKEMLAASAKNRFAPQKKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virD4 YP_001610010.1 conjugal transfer coupling protein TraG Not tested Not named Protein 0.0 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virD4 YP_001610010.1 conjugal transfer coupling protein TraG VFG2242 Protein 0.0 85