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Name : YpAngola_A3943 (YpAngola_A3943) Accession : - Strain : Yersinia pestis Angola Genome accession: NC_010159 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 4191033 - 4192546 bp Length : 1514 bp Strand : - Note : type III secretion outer membrane pore, YscC/HrcC family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIG DNA sequence : ATGTCGCTAATCTATATCATGAGAAAAATAACGGGTCTGATATTACTTTTTTTTGCCACATTGTTGCCTTATGGGAAATT TTCTTATGTAAAAGCGATTCCTTGGCAAGGCGAGCCTTTTTTTATTTATAGCCGAGGCATGACAGTTTCTGAATTATTAA AAGATTTGGGGATGAATTACGGTATTCCTGTGGTGATCAGTTCGGAAATAAACGAGCACTTTACTGGAAAGATTAGGGAT AAGACACCTGAAAAAATCCTATCGGAGTTGGCTGGGCGATATAATATAACGTGGTATTACGATGGTGAAACACTCTATTT TTACCCAGTTCAATCAAGCGGGAGTTTATATCCCCCGATGGTCTGGCTGCCAATACGTTAGTTAAATATCTCCAGCGCGG TGACGTGCTGGCGGGGAAAAACTGTGCCATAAAAGCGATCCCCCACCTTGATACCCTTGAGGTCAAGGGAGTGCCTATCT GCATCGAACGCGTAAAGTCAGTAAGCAAAATGCTTTCTGAGCAAGTTCGTCACCAAAACCAAAATAAAGAAACAGTGAAA GTTTTCCCGCTGAAATATGCTTCAGCAGCGGATTCAGATTATCAGTACCGAGATCAAAACGTCAGATTACCGGGGTTGGT CAGTGTGTTACGTGAGTTGAACCAAGGGAATAATTTGCCTTTGGCGGGCGGTAACCAACCAGATGGAAATCAAGCAAGCT CACCGGTGTTTTCGGCTGATCCTCGGCAAAATGCCGTCATTATTCGCGATCGCCAGGCTAATATGCCGATTTATCGCAGC TTGATTACCCAACTGGATCAGCGGCCAATTCAGATAGAAATTTCTGTCACTATTATTGATGTTGATGCGGGAGATATCAG CCAACTGGGTGTTGATTGGTCTGCATCTGCTTCTATTGGTGGAACGGGGGTCTCATTTAATAGCACCTTCGCCAAGAATA ATGCTGAAGGCTTTTCTACCGTGATTGGTGATACGGGGAACTTTATGGTTCGTCTGAATGCGTTACAAAAAAATTCACGA GCCAGAATTTTATCTCAACCTTCAGTGGTGACCCTGAACAATATTCAGGCGGTACTGGATAAAAACGTGACGTTTTATAC CAAGCTGCAAGGTGAGAAAGTGGCCAAACTTGAATCTGTCACTTCAGGGTCATTACTGCGAGTGACGCCAAGAATGATCG AGACCGAAGGGGTACAAGAGGTTTTACTGAATCTCAATATTCAGGATGGTCAGCAGCAAGCTTCTACCAATAGTAATGAG CCATTACCCGAAATACGAAACTCAGATATTTCGACGCAGGCCACGCTACAGGTTGGACAAAGTTTACTCTTGGGCGGATT TATTCAGGACACGCAGATTGAGTCACAAAATAAAATTCCTTTACTGGGCGATATTCCGCTATTAGGTGGGTTGTTCCGTA GTACAGATAAACAATCTCACAGCGTGGTCAGACTCTTCCTGATCAAGGCCGTTCCGGTTAATGCAGGGGAATAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0257 | YP_002345337.1 | type III secretion protein | Virulence | Not named | DNA | 0.0 | 100 |
