Gene Information

Name : YpAngola_A3154 (YpAngola_A3154)
Accession : YP_001607516.1
Strain : Yersinia pestis Angola
Genome accession: NC_010159
Putative virulence/resistance : Unknown
Product : insertion sequence transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 3341001 - 3342023 bp
Length : 1023 bp
Strand : -
Note : identified by match to protein family HMM PF00665; match to protein family HMM PF02796

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT
GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCTTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG
GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC
CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA
CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG
AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCTTGATGAAAATCTGGTGAACTTC
GACAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA

Protein sequence :
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV
IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR
YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF
DKHPLHHPLSIYDSFCRGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 7e-165 100
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 9e-165 100
api83 CAF28557.1 transposase Not tested YAPI Protein 7e-165 100
unnamed CAA21403.1 - Not tested HPI Protein 9e-165 100
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 9e-165 100
y2411 NP_669718.1 transposase Not tested HPI Protein 9e-165 100
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 4e-163 99
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 9e-164 99
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 9e-164 99
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 9e-164 99
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 9e-164 99
unnamed AAG37051.1 unknown Not tested espC PAI Protein 6e-154 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpAngola_A3154 YP_001607516.1 insertion sequence transposase VFG1514 Protein 5e-164 99
YpAngola_A3154 YP_001607516.1 insertion sequence transposase VFG1626 Protein 5e-164 99
YpAngola_A3154 YP_001607516.1 insertion sequence transposase VFG1607 Protein 5e-164 99
YpAngola_A3154 YP_001607516.1 insertion sequence transposase VFG1461 Protein 2e-163 99
YpAngola_A3154 YP_001607516.1 insertion sequence transposase VFG0780 Protein 3e-154 96