Gene Information

Name : YpAngola_A0178 (YpAngola_A0178)
Accession : YP_001604805.1
Strain : Yersinia pestis Angola
Genome accession: NC_010159
Putative virulence/resistance : Unknown
Product : IS1, transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 190049 - 190312 bp
Length : 264 bp
Strand : -
Note : identified by match to protein family HMM PF03811

DNA sequence : 
ATGGCTTGCATTAACGTTCATTGTCCCCGTTGTGATTCTGCTTTGGTTTATCGACATGGTCAGAACCCTAAGGGCCAAAG
CCGTTTCCGCTGCCGTGAGTGCCGCTCTGTATTCCAACTGACCTACACTTATCAGGCCAGAAAGCCCGAAGTTAAAGGGC
AGATCGTTGATATAGCCTTTAGCGGCACAGGTGTGTGGGATACGGCAAGAACGCTAAAAATCGGTATCAATACCGTTATC
CGCACTTTAAAAAACTCTTGCTGA

Protein sequence : 
MACINVHCPRCDSALVYRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPEVKGQIVDIAFSGTGVWDTARTLKIGINTVI
RTLKNSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 9e-15 57
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 7e-15 57
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 2e-13 42
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 2e-13 42
insA AEZ06026.1 InsA Not tested AbaR24 Protein 6e-13 41
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 8e-13 41
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 3e-13 41
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 8e-13 41
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 8e-13 41
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 3e-13 41
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 6e-13 41
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 6e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpAngola_A0178 YP_001604805.1 IS1, transposase orfA VFG1690 Protein 3e-15 57