Gene Information

Name : rdgB (YpAngola_A0142)
Accession : YP_001604772.1
Strain : Yersinia pestis Angola
Genome accession: NC_010159
Putative virulence/resistance : Unknown
Product : putative deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 140863 - 141522 bp
Length : 660 bp
Strand : +
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
TTGTCAGCCCAACAGACTGCGCTCAATACCGATAGCCGTCAGCCTATAAAAATTCAGGATTCATCGATGCAAAAAATAGT
ATTAGCCACCGGCAACCCCGGCAAAGTACGTGAACTGGCAAACCTGCTGGCCGACTTTGGTTTGGATGTCGTCGCACAAA
CCGAACTGGGCGTTGAGTCTGCAGAAGAGACGGGCTTAACCTTTATTGAAAACGCCATTTTAAAAGCCCGCCATGCAGCG
CAAACCACCGGTTTACCGGCCATCGCCGATGATTCAGGCTTAGCAGTAGACGCGTTAGGCGGCGCTCCGGGGATTTATTC
CGCACGCTATGCCGGTACTGATGCCAGTGACCAAGAGAATCTGGAAAAGCTGTTGGTCGCATTGCAAAATGTCCCCGATG
AAAAACGCGGTGCTCAGTTCCATTGCGTATTGGTCTATATGCGTCATGCTGAAGATCCAACACCGCTGGTGTTCCACGGC
CAATGGCCAGGGGTAATTGCTCACCAACCTGCTGGGGCTGCTGGGTTTGGCTATGACCCTATTTTCTATGTACCCGCGCT
GGGTAAAACCGCAGCGGAACTGACTCGTGAAGAAAAGCACGCGGTATCCCATCGTGGTCAGGCCCTGAAATTGATGCTGG
ATGCGCTGCGCGATGCTTAA

Protein sequence :
MSAQQTALNTDSRQPIKIQDSSMQKIVLATGNPGKVRELANLLADFGLDVVAQTELGVESAEETGLTFIENAILKARHAA
QTTGLPAIADDSGLAVDALGGAPGIYSARYAGTDASDQENLEKLLVALQNVPDEKRGAQFHCVLVYMRHAEDPTPLVFHG
QWPGVIAHQPAGAAGFGYDPIFYVPALGKTAAELTREEKHAVSHRGQALKLMLDALRDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 3e-27 42