Gene Information

Name : YpAngola_A1272 (YpAngola_A1272)
Accession : YP_001605807.1
Strain : Yersinia pestis Angola
Genome accession: NC_010159
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1330606 - 1331292 bp
Length : 687 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAATAAGCACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCTGCCCAGACAATTGCGCTGATTGGCGAGTCGGGTTCAGGCAAATCAACATTATTGG
GGATTCTGGCCGGGCTGGATGATGGCAGCAGCGGTGATGTGAGCTTGCTTGGGCAGTCATTGACCACGATGGATGAAGAA
GGTCGCGCGCTACTCCGGGCGAAAAATGTCGGCTTTGTCTTTCAGTCGTTTATGTTGGTTCCTACATTGAACACGCTTGA
AAACGTTCAACTACCGGCATTACTCCGTGGTGAGAGTGATCGCCAAAGCAAATCGCAAGCTATTGAATTATTGGAGCAAC
TTGGGCTGAGCAAGCGCCTTTACCATCTTCCCGCCCAACTGTCCGGTGGTGAACAACAGCGAGTTGCACTGGCCCGGGCT
TTCAGTGGGCGGCCAAAAATCTTATTTGCTGATGAGCCAACCGGTAATCTTGACCGGCAGACGGGTGATCGTATCGCTGA
TTTGCTGTTTTCCCTAAACCGGGATTTCGCGACCACGTTGATTCTGGTCACACATGATGAACAACTGGCCGGTCGTTGTC
AGCGTCGGTTGCGCCTGAGGGACGGTAAATTGTGGGAGGAGTCATGA

Protein sequence : 
MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSSGDVSLLGQSLTTMDEE
GRALLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESDRQSKSQAIELLEQLGLSKRLYHLPAQLSGGEQQRVALARA
FSGRPKILFADEPTGNLDRQTGDRIADLLFSLNRDFATTLILVTHDEQLAGRCQRRLRLRDGKLWEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpAngola_A1272 YP_001605807.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 6e-34 45
YpAngola_A1272 YP_001605807.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 2e-38 43
YpAngola_A1272 YP_001605807.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 5e-36 41