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Name : YpAngola_A1189 (YpAngola_A1189) Accession : YP_001605731.1 Strain : Yersinia pestis Angola Genome accession: NC_010159 Putative virulence/resistance : Virulence Product : RHS repeat family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 1232691 - 1235549 bp Length : 2859 bp Strand : + Note : identified by match to protein family HMM TIGR01643 DNA sequence : ATGTCCACAAGTTTACCAACCCAGCTTTGCGCCAACACCCCCGCCCTCACCATCCACGATAACCGGGGGTTAGCTATTCG TACACTGGCTTATAACCGCCGCGATCATAATGAAACCGTTGACGAACTGATCAGCCGCAACCGCTATAACGCCTCCGGTC AGCTAATCGCCAGCCGTGATCCGCGCCTTGAGGTGGATAATTTCCGCTATCAATACAGCCTCAGCGGTGTTCCACTGCGC ACCGACAGCGTCGATAGCGGCAGTACACTGCAACTGGCAGATAGTGCTGGCCGCACGGTGCTCACGCTCGATGCACACCA CACCCGCCGCTGGGTGGAGTATGAGACCGGTGAACACAGTTTAGGCCGCCCGCTAAGTTACCACGAGCAAGCCAAAGGCG GCCTGAAAACGGTTACCGACCGCTTTTTCTATGCCACAAACAGCGAGCAGGATAAAAACTGCAACCTGAACGGCCAGTGT GTACGCCATTACGACAGCGCTGGTTTGCAGGCACTGATTAGCCAGTCGATTATTGGCGTACCACTGCAACAACAGCGCCG TCTACTGACGAATCCCAAAGGCCCAGTTGACTGGTTTGGCGAAAAGGAAAACTGGGGCGCTCGCCTGAGCGAACAGCCGT TTGTTAGCCATAGCACCACCGATGCTCTCGGCCAGTTACTCACGCAAACCGATGCCAAAGGCCATATCCAGCGCATGGCC TATAACCGCGCCGGACAACTTATCGGTTCGTGGCTAACAATAAAAAATAGCGCTGAACAGGTGATCCTCCGTTCACTCAC CTATTCGGCTGCTGGGCAAAAACTGCGCGAAGAGAGCGGCAACGGGGTGATTACCGAATACCGTTATGAACCCCAGACTC AGCGCTTAATCGGCATTAAAACCACCCGTCCGGCGAAGAAAGACCGCCCGACCCGGTTACAAGACCTGCGTTACGATTAT GACCCGGTCGGGAATATTCTCGCCATCCATAATGACGCCGAAACCACCCGCTTCTACCGTAATCAGAAAATCGTGCCGGA AACCACTTACCGCTACGATGCACTGTATCAGCTTATCGAGGCCACTGGCCGTGAAGCGGATACCAACGGCATACAAAACA GCCAGTTACCCGCGTTGGCGTCACTGAACGACAGCAACCAGTTCGTCAACTACACCCGCAGCTACCACTATGACCGCGCC GGTAACCTGCTAAAAATTCAGCATACCGGTGCCAGCCAATACAGTACCCATATCACGGTGTCCGATTCGTCCAATCACGG CATTCAGCAACAAGATGGCATCATCGCCCGTGATATTCGCTCCCAGTTTGATGCGGCGGGTAATCAGCAACAACTGCAAC CCGGTCAGCCCCTGCGCTGGAACAGCCGCAATCAGTTACAGCAGGTGGAACCTGTGCCCCGCAACGATGGCATCAGTGAC AGCGAAAGTTATCTCTATGATGGCAGCGGTAGGCGGGTGGCCAAAATCAGTCTCCATAAAACCCATAACGCCATCCAAAC CCGTTCGGTCATTTATTTAGCGGGACTGGAACTGCGTGGCCAACATAATGACAATAATCTGACAGAAAGTTTTCAGGTGA TAACCGTGGGTGCTGCGGGCCGTGCTCAGGTACGGGTATTACACTGGGAGAGCGGCCAACCCGTTGATATCGTCAATGAC CAACTGCGTTACAGTTTCGATAATCACCTTGGCTCGGCGTTAATCGAATTAGACAGCGATGGCGATATTATCAGCCAGGA AGAATATTACCCATTTGGCGGTACCGCGGTGTTAGCCTCCCGTAATACCGTGGAAGCCAAATATAAAACCGTTCGTTATT CCGGTAAAGAGCGCGATGCCACCGGGCTGTATTATTATGGTTACCGTTATTACCAACCGTGGCTGGGCCGATGGTTAAGC GCCGACCCCGCAGGCACTATAGACGGACTGAATTTATATCGGATGGTGAGGAATAACCCAATCAGATGGCGTGATAACAA TGGGCTATTAACCGAAGAGCAAATTAATATGTACGTTAATTTGTTTAGTAATATTGGATTAAAAAATGATGATGAATTAA AGAGTGAATTATTAAAATATGGTTTAAGTGAAGAAGAGCAAAACCAGATATACCTTAATATGTTAAGACCTATGCAGTCT GGATCATCAAGCTCATTATTCTCCTTCCCTTCTGAAAGTAGTTCAAGTTCTGGGAGTACGCAAAGTGTTGATTCAGGTTA TCTCAGTCCAGTAAGAAACTATCATTTTTTTGAAGATATTAAGTTAGCAACAATGCACCGTCCCTATCCAAAAAAACAAG CCTCTAGTGACACAATAACATATTCAGCAGAAGATTTAACAGAAGCTAGCCCTATAAAAATTCTCATTGGTTTGGATTTG ACCAGTAAAAACACCCAACCATATAAGTCAGCGCTTGCCGAAAAAGGAATTAAGTATATCACTAAAGAAAAATATGAAAT AACAGACTTTTTTGAAGAAGGAGGATTATCGACTGAACAAATAGATTTAACAGTAAATAAAATATTAAAATTACAAAAAA AGGATCTTGTAGGAATTCATTGTGGGGCAGGTAATGGAAGAAGTGGAGTTATTGCATCAGCATTATCCATTAATAAACAG TATACAACAGATAAAATAAATAGTTTTGACGTAACTCATTCATTAAGAGGGTCAATACTTAAAGACACACAAACATACCA AGTGGATACGGTAACCGCCAAGGCGGTTGGGATTATCAGAGAAATAAATCCTAAAGCAGTGGAACGTAATCAGGATGTTA TTTCCCTATATAGATATTCTCATTTTTTATATACAAGAAAACACACTACATCATTATAA Protein sequence : MSTSLPTQLCANTPALTIHDNRGLAIRTLAYNRRDHNETVDELISRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR TDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHSLGRPLSYHEQAKGGLKTVTDRFFYATNSEQDKNCNLNGQC VRHYDSAGLQALISQSIIGVPLQQQRRLLTNPKGPVDWFGEKENWGARLSEQPFVSHSTTDALGQLLTQTDAKGHIQRMA YNRAGQLIGSWLTIKNSAEQVILRSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDY DPVGNILAIHNDAETTRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPALASLNDSNQFVNYTRSYHYDRA GNLLKIQHTGASQYSTHITVSDSSNHGIQQQDGIIARDIRSQFDAAGNQQQLQPGQPLRWNSRNQLQQVEPVPRNDGISD SESYLYDGSGRRVAKISLHKTHNAIQTRSVIYLAGLELRGQHNDNNLTESFQVITVGAAGRAQVRVLHWESGQPVDIVND QLRYSFDNHLGSALIELDSDGDIISQEEYYPFGGTAVLASRNTVEAKYKTVRYSGKERDATGLYYYGYRYYQPWLGRWLS ADPAGTIDGLNLYRMVRNNPIRWRDNNGLLTEEQINMYVNLFSNIGLKNDDELKSELLKYGLSEEEQNQIYLNMLRPMQS GSSSSLFSFPSESSSSSGSTQSVDSGYLSPVRNYHFFEDIKLATMHRPYPKKQASSDTITYSAEDLTEASPIKILIGLDL TSKNTQPYKSALAEKGIKYITKEKYEITDFFEEGGLSTEQIDLTVNKILKLQKKDLVGIHCGAGNGRSGVIASALSINKQ YTTDKINSFDVTHSLRGSILKDTQTYQVDTVTAKAVGIIREINPKAVERNQDVISLYRYSHFLYTRKHTTSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tccC | CAI77380.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 0.0 | 67 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 2e-150 | 55 |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 1e-152 | 55 |
| TccC2 | AAL18492.2 | TccC2 | Virulence | tcd island | Protein | 1e-152 | 54 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 2e-152 | 54 |
