Gene Information

Name : YpAngola_0030 (YpAngola_0030)
Accession : YP_001604548.1
Strain :
Genome accession: NC_010158
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 20325 - 21104 bp
Length : 780 bp
Strand : +
Note : identified by match to protein family HMM PF01695

DNA sequence :
ATGATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGC
GCTGTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCAC
GTCATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACA
TTCGCCACCGGAGCACCGCAGAAGCAACACCAGTCGTTACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATT
ACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGATGGGCTATGAAGCAGTCCGTGCAGGTATCAAAGTTC
GCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGCACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGT
GGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAGCTGTTCTT
CCAGGTCATCGCTAAACGTTACGAAAAGAGCGCAATGATCCTGACATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGT
TCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGACCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAA
AGCTATCGACTCAGACAGAAACGAAAGGCCGGGGTTATAGCAGAAGCTAATCCTGAGTAA

Protein sequence :
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFT
FATGAPQKQHQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQR
GVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGE
SYRLRQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-119 99
unnamed CAA21402.1 - Not tested HPI Protein 2e-119 99
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-119 99
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-119 99
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-119 99
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 8e-119 99
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-119 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-119 99
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-119 99
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-119 99
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-119 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-119 99
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-85 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpAngola_0030 YP_001604548.1 transposase/IS protein VFG1627 Protein 7e-120 99
YpAngola_0030 YP_001604548.1 transposase/IS protein VFG1606 Protein 7e-120 99
YpAngola_0030 YP_001604548.1 transposase/IS protein VFG1663 Protein 5e-119 99
YpAngola_0030 YP_001604548.1 transposase/IS protein VFG1515 Protein 7e-120 99
YpAngola_0030 YP_001604548.1 transposase/IS protein VFG1460 Protein 2e-85 99