Gene Information

Name : tnpR (YpAngola_B0090)
Accession : YP_001604517.1
Strain :
Genome accession: NC_010157
Putative virulence/resistance : Resistance
Product : resolvase TnpR
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 62939 - 63490 bp
Length : 552 bp
Strand : +
Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796

DNA sequence : 
ATGCGACTTTTTGGTTACGCGCGGGTATCAACCAGTCAGCAATCCCTCGATATTCAGATCAAAACACTCAAAGACGTGGG
CGTGAAAGCAAATCGTATATTTACTGATAAGGCATCCGGCAGCTCTGCCGACAGGGAGGGGCTGGATCTGCTGCGTATGA
AGGTGGAAGAAGGTGACGTCATTCTAGTGAAGAAGCTCGACCGTCTTGGCCGCGACACCGTCGACATGATCCAGTTGATA
AAAGAGTTTGACGCCCAGGGTGTGTCCATCCAGTTTATTGATGACGGAATCAGTACCGATGGGGAAATGGGTAAAATGGT
TGTCACTATTCTATCAGCAGTGGCTCAAGCCGAACGACAGAGAATACTGGAGCGTACAAATGAAGGGAGAGAAGAGGCTA
AGCTAAAGGGGGTTAAATTCGGACGAAAGCGCAGAATCAACAGAAAGGAACTACTCGAATTGCATGAACAGGGGATGGGC
GCGACAGAAATAGCCAAAAAAATGAATATAGCTCGTTCAACTATTTATAAAGTCATCAATGAATCACAATAA

Protein sequence : 
MRLFGYARVSTSQQSLDIQIKTLKDVGVKANRIFTDKASGSSADREGLDLLRMKVEEGDVILVKKLDRLGRDTVDMIQLI
KEFDAQGVSIQFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKELLELHEQGMG
ATEIAKKMNIARSTIYKVINESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 4e-70 80
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 4e-70 80
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 4e-70 80
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 1e-69 80
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 2e-61 79
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 3e-63 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR YP_001604517.1 resolvase TnpR GU371926.1.gene95.p0 Protein 8e-70 80