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Name : yscU (YpAngola_B0048) Accession : YP_001604479.1 Strain : Genome accession: NC_010157 Putative virulence/resistance : Virulence Product : type III secretion appartus protein YscU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 31593 - 32657 bp Length : 1065 bp Strand : + Note : identified by similarity to SP:P69987; match to protein family HMM PF01312; match to protein family HMM TIGR01404 DNA sequence : ATGAGCGGAGAAAAGACAGAGCAACCCACCCCGAAGAAAATCCGTGATGCGCGCAAAAAGGGACAGGTAGCGAAAAGTAA GGAAGTGGTCTCTACTGCGCTTATCGTCGCGCTGAGTGCGATGTTAATGTGGCTTTCTGACTACTATTTCGAGCATTTTA GTAAGCTGATGCTAATCCCCGCAGAGCAGAGCTATCTTCCTTTCTCGCAGGCGCTTAGCTATGTGGTTGACAATGTGTTG CTCGAGTTTTTTTATCTCTGTTTTCCTTTGTTAACAGTGGCGGCATTAATGGCGATCGCATCTCATGTTGTGCAGTATGG TTTTCTTATAAGTGGTGAAGCAATTAAACCGGATATTAAAAAAATCAATCCAATAGAGGGTGCCAAGCGTATCTTTTCCA TCAAAAGTTTAGTGGAGTTTCTCAAATCCATTCTCAAGGTTGTTTTGCTCAGTATACTCATCTGGATAATCATTAAGGGA AATCTAGTCACACTCTTGCAGTTGCCAACCTGTGGAATTGAATGTATTACCCCTTTATTGGGGCAAATACTCCGGCAGTT GATGGTTATCTGTACTGTTGGCTTTGTGGTCATCTCCATAGCCGACTATGCCTTTGAATACTATCAATATATTAAGGAAC TTAAAATGAGCAAGGATGAGATCAAACGCGAGTACAAAGAAATGGAGGGTAGCCCAGAAATCAAAAGCAAGCGTCGTCAG TTTCATCAAGAGATCCAATCGAGGAACATGCGGGAAAATGTTAAACGCTCATCAGTGGTGGTAGCTAATCCGACCCATAT TGCTATTGGTATTCTTTACAAGCGAGGGGAAACACCACTACCGTTGGTAACATTCAAATATACCGATGCCCAAGTTCAGA CTGTGCGCAAAATAGCAGAAGAAGAAGGGGTGCCTATTTTACAACGTATCCCATTAGCCCGTGCTCTTTATTGGGATGCG CTCGTCGATCACTATATTCCGGCTGAGCAAATAGAGGCCACAGCTGAAGTGCTACGATGGCTAGAAAGGCAAAATATCGA GAAACAACATTCCGAAATGTTATAA Protein sequence : MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMWLSDYYFEHFSKLMLIPAEQSYLPFSQALSYVVDNVL LEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKG NLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQ FHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDA LVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 3e-114 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscU | YP_001604479.1 | type III secretion appartus protein YscU | VFG0397 | Protein | 5e-155 | 99 |
| yscU | YP_001604479.1 | type III secretion appartus protein YscU | VFG0185 | Protein | 4e-95 | 67 |
