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Name : yscO (YpAngola_B0042) Accession : YP_001604473.1 Strain : Genome accession: NC_010157 Putative virulence/resistance : Virulence Product : type III secretion protein YscO Function : - COG functional category : - COG ID : - EC number : - Position : 27142 - 27606 bp Length : 465 bp Strand : + Note : identified by similarity to SP:P40294; match to protein family HMM PF07321 DNA sequence : ATGATACGCCGCCTGCACCGGGTTAAAGTTTTACGCGTTGAACGTGCGGAGAAAGCCATCAAGACTCAGCAAGCTTGCTT GCAGGCAGCTCATCGACGTCATCAAGAGGCGGTGCAAACCAGTCAGGATTACCATTTGTGGCGTATTGATGAGGAGCAAC GTCTATTTGATCAGCGAAAAAACACCACACTGAATTGTAAAGATTTGGAGAAATGGCAGCGACAAATAGCGTCGCTACGT GAAAAGGAGGCCAATTATGAACTGGAGTGCGCCAAATTATTGGAACGTTTAGCCAATGAGCGTGAGCGCCTTACGTTATG CCAAAAGATGCTGCAACAGGCTCGTCATAAGGAAAATAAGTTTCTCGAGCTAGTGCGACGAGAAGATGAAGATGAGCTAA ATCAACAACATTATCAGGAAGAACAAGAACAAGAAGAGTTTCTACAGCATCACAGGAACGCCTAA Protein sequence : MIRRLHRVKVLRVERAEKAIKTQQACLQAAHRRHQEAVQTSQDYHLWRIDEEQRLFDQRKNTTLNCKDLEKWQRQIASLR EKEANYELECAKLLERLANERERLTLCQKMLQQARHKENKFLELVRREDEDELNQQHYQEEQEQEEFLQHHRNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscO | AAO18043.1 | LscO | Virulence | TTSS locus | Protein | 2e-20 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscO | YP_001604473.1 | type III secretion protein YscO | VFG0391 | Protein | 3e-43 | 100 |
