Gene Information

Name : sycN (YpAngola_B0038)
Accession : YP_001604469.1
Strain :
Genome accession: NC_010157
Putative virulence/resistance : Virulence
Product : YopN-specific chaperone SycN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 24130 - 24501 bp
Length : 372 bp
Strand : -
Note : identified by similarity to SP:P61381; match to protein family HMM TIGR02503

DNA sequence : 
GTGAGTTGGATTGAACCCATCATTTCCCATTTCTGCCAGGATCTGGGAGTGCCAACATCTAGCCCCCTTTCGCCTCTTAT
TCAATTAGAGATGGCTCAATCTGGCACGCTGCAACTGGAACAACATGGTGCGACACTGACATTGTGGTTAGCGCGTTCTC
TTGCCTGGCACCGGTGCGAAGATGCTATGGTCAAAGCGCTAACGCTCACGGCGGCCCAAAAGAGTGGCGCTTTACCGCTG
CGAGCGGGGTGGTTAGGGGAAAGTCAGCTGGTGTTATTTGTCTCGCTTGATGAGCGTTCCTTAACCTTGCCCCTTTTACA
TCAAGCTTTCGAACAGTTACTGCGATTGCAGCAAGAGGTGCTTGCGCCGTGA

Protein sequence : 
MSWIEPIISHFCQDLGVPTSSPLSPLIQLEMAQSGTLQLEQHGATLTLWLARSLAWHRCEDAMVKALTLTAAQKSGALPL
RAGWLGESQLVLFVSLDERSLTLPLLHQAFEQLLRLQQEVLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssN AAO18047.1 LssN Virulence TTSS locus Protein 3e-32 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sycN YP_001604469.1 YopN-specific chaperone SycN VFG0387 Protein 2e-51 100
sycN YP_001604469.1 YopN-specific chaperone SycN VFG0195 Protein 8e-26 48