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Name : yopB (YpAngola_B0030) Accession : YP_001604461.1 Strain : Genome accession: NC_010157 Putative virulence/resistance : Virulence Product : translocator protein YopB Function : - COG functional category : S : Function unknown COG ID : COG5613 EC number : - Position : 17873 - 19078 bp Length : 1206 bp Strand : - Note : identified by similarity to SP:Q06114; match to protein family HMM PF04888 DNA sequence : ATGAGTGCGTTGATAACCCATGACCGCTCAACGCCAGTAACTGGAAGTCTACTTCCCTACGTCGAGACACCAGCGCCCGC CCCCCTTCAGACCCAACAAGTCGCGGGAGAACTGAAGGATAAAAATGGCGGGGTGAGTTCTCAGGGCGTACAGCTCCCTG CACCACTAGCAGTGGTTGCCAGCCAAGTTACTGAAGGACAACAGCAAGAAGTCACTAAATTATTGGAGTCGGTCACCCGC GGCGCGGCAGGATCTCAACTGATATCAAATTATGTTTCAGTGCTAACGAAGTTTACGCTTGCTTCACCTGATACATTTGA GATTGAGTTAGGTAAGCTAGTTTCTAATTTAGAAGAAGTACGCAAAGACATAAAAATCGCTGATATTCAGCGTCTTCATG AACAAAACATGAAGAAAATTGAAGAGAATCAAGAGAAAATCAAAGAAACAGAAGAGAATGCCAAGCAAGTCAAGAAATCC GGCATCGCATCAAAGATTTTTGGCTGGCTCAGCGCCATAGCCTCAGTGATTGTCGGTGCCATCATGGTGGCCTCAGGGGT AGGAGCCGTTGCCGGTGCAATGATGGTTGCCTCAGGCGTAATTGGGATGGCGAATATGGCAGTGAAACAAGCGGCGGAAG ATGGCCTGATATCCCAAGAGGCAATGAAAATATTAGGGCCGATACTCACTGCGATTGAAGTCGCATTGACTGTAGTTTCA ACCGTAATGACCTTTGGCGGTTCGGCACTAAAATGCCTGGCTAATATTGGCGCAAAACTCGGTGCTAACACCGCAAGTCT TGTGGCTAAAGGAGCCGAGTTTTCGGCCAAAGTTGCCCAAATTTCGACAGGCATATCAAACACTGTCGGGAGTGCAGTGA CTAAATTAGGGGGCAGTTTTGCTGGTTTAACAATGAGCCATGCAATCCGTACAGGATCACAGGCAACACAAGTCGCCGTT GGTGTGGGCAGCGGAATAACTCAGACCATCAATAATAAAAAGCAAGCTGATTTACAACATAATAACGCTGATTTGGCCTT GAACAAGGCAGACATGGCAGCGTTACAAAGTATTATTGACCGACTCAAAGAAGAGTTATCCCATTTGTCAGAGTCACATC AACAAGTGATGGAACTGATTTTCCAGATGATTAATGCAAAAGGTGACATGCTGCATAATTTGGCCGGCAGACCCCATACT GTTTAA Protein sequence : MSALITHDRSTPVTGSLLPYVETPAPAPLQTQQVAGELKDKNGGVSSQGVQLPAPLAVVASQVTEGQQQEVTKLLESVTR GAAGSQLISNYVSVLTKFTLASPDTFEIELGKLVSNLEEVRKDIKIADIQRLHEQNMKKIEENQEKIKETEENAKQVKKS GIASKIFGWLSAIASVIVGAIMVASGVGAVAGAMMVASGVIGMANMAVKQAAEDGLISQEAMKILGPILTAIEVALTVVS TVMTFGGSALKCLANIGAKLGANTASLVAKGAEFSAKVAQISTGISNTVGSAVTKLGGSFAGLTMSHAIRTGSQATQVAV GVGSGITQTINNKKQADLQHNNADLALNKADMAALQSIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAGRPHT V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopB | AAO18055.1 | LopB | Virulence | TTSS locus | Protein | 7e-41 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yopB | YP_001604461.1 | translocator protein YopB | VFG0379 | Protein | 3e-158 | 100 |
| yopB | YP_001604461.1 | translocator protein YopB | VFG0203 | Protein | 3e-44 | 42 |
