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Name : yopD (YpAngola_B0029) Accession : YP_001604460.1 Strain : Genome accession: NC_010157 Putative virulence/resistance : Virulence Product : translocator protein YopD Function : - COG functional category : - COG ID : - EC number : - Position : 16934 - 17854 bp Length : 921 bp Strand : - Note : identified by similarity to SP:Q06131; match to protein family HMM PF05844 DNA sequence : ATGACAATAAATATCAAGACAGACAGCCCAATTATCACGACCGGTTCACAGCTTGATGCCATCACTACAGAGACAGTCAA GCAAAGCGGTGAGATTAAAAAAACAGAAGACACCCGTCATGAAGCACAAGCAATAAAGAGTAGCGAGGCAAGCTTATCTC GGTCACAGGTGCCAGAATTGATCAAACCGAGCCAGGGAATCAATGTTGCATTACTGAGTAAAAGCCAGGGTGATCTTAAT GGTACTTTAAGTATCTTGTTGTTGCTGTTGGAACTGGCACGTAAAGCGCGAGAAATGGGTTTGCAACAAAGGGATATAGA AAATAAAGCTACTATTACTGCCCAAAAGGAGCAGGTAGCGGAGATGGTCAGCGGTGCAAAACTGATGATCGCCATGGCGG TGGTGTCTGGCATCATGGCTGCTACTTCTACGGTTGCTAGTGCTTTTTCTATAGCGAAAGAGGTGAAAATAGTTAAACAG GAACAAATTCTAAACAGTAATATTGCTGGCCGCGAACAACTTATTGATACAAAAATGCAGCAAATGAGTAACATTGGTGA TAAAGCGGTAAGCAGAGAGGATATCGGGAGAATATGGAAACCAGAGCAGGTAGCGGATCAAAATAAGCTGGCATTATTGG ATAAAGAATTCAGAATGACCGACTCAAAAGCCAATGCGTTTAATGCCGCAACGCAGCCGTTAGGACAAATGGCAAACAGT GCGATTCAAGTTCATCAAGGGTATTCTCAAGCCGAGGTCAAAGAGAAAGAAGTCAATGCAAGTATTGCTGCCAACGAGAA GCAAAAAGCCGAAGAGGCGATGAACTATAATGATAACTTTATGAAAGATGTCCTGCGCTTGATTGAACAATATGTTAGCA GTCATACTCACGCCATGAAAGCCGCTTTTGGTGTTGTCTGA Protein sequence : MTINIKTDSPIITTGSQLDAITTETVKQSGEIKKTEDTRHEAQAIKSSEASLSRSQVPELIKPSQGINVALLSKSQGDLN GTLSILLLLLELARKAREMGLQQRDIENKATITAQKEQVAEMVSGAKLMIAMAVVSGIMAATSTVASAFSIAKEVKIVKQ EQILNSNIAGREQLIDTKMQQMSNIGDKAVSREDIGRIWKPEQVADQNKLALLDKEFRMTDSKANAFNAATQPLGQMANS AIQVHQGYSQAEVKEKEVNASIAANEKQKAEEAMNYNDNFMKDVLRLIEQYVSSHTHAMKAAFGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopD | AAO18056.1 | LopD | Virulence | TTSS locus | Protein | 7e-44 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yopD | YP_001604460.1 | translocator protein YopD | VFG0378 | Protein | 2e-132 | 100 |
