Gene Information

Name : lolD (GDI_3022)
Accession : YP_001603254.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_010125
Putative virulence/resistance : Virulence
Product : lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3112002 - 3112715 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAGACCGTGAATGAGGCTGGCCGGGACCCGCTGGTGCTGTCCGACGTCTGGCGCACGTTCCACAGCGGGGACGA
GCGGCTGGACGTGCTGCAGGGCGCGGACCTGACCCTGCGCGCGGGCGAGATCGTGGCCCTGGTCGCGCCGTCGGGCACCG
GCAAATCGACCCTGCTGCATCTGGCCGGATTGCTGGAATCCCCTGATCGCGGGCAGGTCCTGGTCGGCGGCCAGGATGCG
GGGCGCCTGGACGATTCCGGGCGCACGGCCATCCGCCGCCGCCGCATCGGCTTCGTCTACCAGTTCCATCACCTGCTGGC
GGAATTCACGGCGCGGGAAAACGTGGTGCTGCCGCAACTGATCGCGGGTGTGGCCAGGGCCGACGCCCGTGCCCGGGCGG
ACGCGCTGCTGGGCTCGTTCGGGCTGGCGCACCGGCTGGACCATCTGCCCGGTCGCCTGTCGGGGGGCGAAAAGCAGCGC
GTGGCCATCGCCCGCGCGCTGGCCAACCGGCCGGGCATCCTGCTGGCGGACGAACCGACCGGCAACCTGGACGTCCACAC
CTCGGACGCGGTGTTCGACGAATTGCTGCGCATGGTCCGGGGCGAGGGCGTGGCCGCCCTGATCGCGACCCATAACGAGG
CCCTGGCCGCCCGCATGGACCGCGTCGTGACCCTGCGCGACGGACGGTTGGTGGACGTGGCCCCCGTGGCGTAG

Protein sequence : 
MSETVNEAGRDPLVLSDVWRTFHSGDERLDVLQGADLTLRAGEIVALVAPSGTGKSTLLHLAGLLESPDRGQVLVGGQDA
GRLDDSGRTAIRRRRIGFVYQFHHLLAEFTARENVVLPQLIAGVARADARARADALLGSFGLAHRLDHLPGRLSGGEKQR
VAIARALANRPGILLADEPTGNLDVHTSDAVFDELLRMVRGEGVAALIATHNEALAARMDRVVTLRDGRLVDVAPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-29 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001603254.1 lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 3e-32 47
lolD YP_001603254.1 lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 4e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001603254.1 lipoprotein-releasing system ATP-binding protein lolD VFG2059 Protein 2e-14 42