Gene Information

Name : GDI_1066 (GDI_1066)
Accession : YP_001601339.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_010125
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1070697 - 1071332 bp
Length : 636 bp
Strand : +
Note : -

DNA sequence :
ATGCGTGCCATGGGCCTAGCCGGCATTCGGCGAGGGAAGAGGACGGTCACGACCATCAGCAATCCCAAGGCTCCGTGCCC
GCTGGACAAGGTGAACCGCGCATTCCGCGTGAGCCGGCCGAATGCCCTGTGGGTGGTCGATTTCACCTACGTCCACACAT
GGGCCGGCTTCGTCTATGTCGCCTTCGTGATCGACGCCTATGCCCGGCGCATCGTCGGCTGGAAGGTCAGCACGTCAGCC
ACCGCCGGCTTCGTGCTGGACGCCCTGGAGCAGGCGATCCATGCCCGCAGGCCCGGACCCGAGGATGGCTTGATCCACCA
TAGTGACAGGGGCGTCCAATACCTCGCCATGAATTACACCCAGCGCCTGGCCGAGGCCGATCTGGTACCCTCGGTCGGCA
GCGTCGGGGACTCCTATGACAATGCCCTGGCCGAGGCCATCAACGGCCTCTACAAGGCCGAGGTCATCTGGCGGCAGCCT
TCCTGGCCGACCGTATCGGCCGTGGAAATGGCAACATTGCGCTGGGTCGATTGGTTCAATAACCATCGCCTCTTTGGCCC
CATCGGCTATATCCCACCCGCCGAGGCCGAAGCCAACTACTATGCAGCCCTCGAGATCATCGATATGGCTGCGTGA

Protein sequence :
MRAMGLAGIRRGKRTVTTISNPKAPCPLDKVNRAFRVSRPNALWVVDFTYVHTWAGFVYVAFVIDAYARRIVGWKVSTSA
TAGFVLDALEQAIHARRPGPEDGLIHHSDRGVQYLAMNYTQRLAEADLVPSVGSVGDSYDNALAEAINGLYKAEVIWRQP
SWPTVSAVEMATLRWVDWFNNHRLFGPIGYIPPAEAEANYYAALEIIDMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 6e-49 62
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 3e-40 62
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-49 62
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-48 62
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-48 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GDI_1066 YP_001601339.1 integrase VFG1715 Protein 9e-41 62