Gene Information

Name : GDI_3866 (GDI_3866)
Accession : YP_001600253.1
Strain :
Genome accession: NC_010124
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1117 - 1965 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTTCTCTCTCGCGTTAGCGCACACCGTCACGCTCAGCCGCTCACCGACGAGCAGTTGCAGCGCCTTGCCCCGAG
CATTTTTGCCGAGGCAAAACATGAATCGCGTTCCGATCGTTACACCTACATTCCCACCATTGAAGTGGTGCGCGGTCTCC
GCTCTGAGGGATTTTTCCCGGTCATGGCGCGGCAGGGAAACTCCCGTATTCCCGGCAAGGCCGAATACACGAAACACCTG
ATCCGGTTCCGGCACATGGACCACGGCCCCATGTATGAGAACCTTGGCGACCTTTACCCCGAGGTTGCGTTGCTCAACTC
CCACGATGGCACATCAGCCTATAAAATCATTGCCGCAATGATGCGCCTTGCGTGCGAGAATGGCATGGTGGTGCAGGATG
CCCGACTGGCAGAGATTTCCGTTCCTCATAAGGGAACGGTGACGGATAAGGTCATTGAGGGCTCTTACACGGTTCTGGAC
GAGAGCCGGAAAGCCCTTGAGATTGCCGGGGAATGGTCCGGCAAGACCCTCACCGAGCGGCAGCAGAAGGGCTTTGCCGA
GGCTGTCCATATCGCCAAGTATGGCGACGACGCCGAGCGGATGCCTTTCACGCCTGAAAGCTATCTCCGCACACGCCGCG
CAGCGGATCAGGGCGCAGACCTTTGGCGCGTTGCCAATCGCGTGCAGGAAAGCGCCATTCGTGGCGGTATGACCGGCTTC
CGCTGGGATGAAGACGGACGCAACCGCAAGCGCGTCACCGCCCGCCCCGTCAAGAGCATTGACGGCGATATTAAACTGAA
CAAGGCAGTCTGGCACCTTGCTCAGATGCTATCCGATCACGCGGCTTAA

Protein sequence :
MSFLSRVSAHRHAQPLTDEQLQRLAPSIFAEAKHESRSDRYTYIPTIEVVRGLRSEGFFPVMARQGNSRIPGKAEYTKHL
IRFRHMDHGPMYENLGDLYPEVALLNSHDGTSAYKIIAAMMRLACENGMVVQDARLAEISVPHKGTVTDKVIEGSYTVLD
ESRKALEIAGEWSGKTLTERQQKGFAEAVHIAKYGDDAERMPFTPESYLRTRRAADQGADLWRVANRVQESAIRGGMTGF
RWDEDGRNRKRVTARPVKSIDGDIKLNKAVWHLAQMLSDHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-47 44
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-48 42
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 9e-42 42
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-41 41
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-41 41
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-41 41
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 7e-42 41
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 7e-42 41
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 7e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GDI_3866 YP_001600253.1 hypothetical protein VFG0658 Protein 5e-42 41
GDI_3866 YP_001600253.1 hypothetical protein VFG1676 Protein 4e-41 41