|
Name : GDI_3875 (GDI_3875) Accession : YP_001600262.1 Strain : Genome accession: NC_010124 Putative virulence/resistance : Unknown Product : putative DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 6981 - 7568 bp Length : 588 bp Strand : + Note : - DNA sequence : ATGAAGATCGGATATGCGCGCGTAAGCCGCGCAGACAAGCAAGATCTGTCTATGCAGATCCAGGCATTAGAGAAGGAAGG GTGCGATACGATCTACCAGGACACGGCCAGCGCCAAGAATACAGCCCGCCCTCAGTTGCAGGAAATGCTACGATATGCGC GGCAAGGCGATGAAATCGTGGTCTGGCGTCTCGATCGGCTCTCACGGAGCCTGACGGATCTTATCAGCCTTACGGATGAC CTGGGGGCCAGGGGCATCGGCCTGCGCTCACTCACGGAACCCGTCTATCAGACAAGCGGCCCAATGGGGCGCGTCGTGCT GCAAATCATGGCCGTGCTGGCAGAGTTTGAGCGCGCAACGATCATAGAACGAACAAAGGCCGGTCTTCGCGCTGCGAAAG AACGCGGCGTGCATGTCGGTCGGCCAAAGCTGCTTTCTGAGGACCAGGCCGCGCATGTCGTACAGGAGATTGAAGCGGGG CGTTTGACACTCAGTGAGGCGGCTAACCTGTTCGGGGTAAGTCGGTCCACGATCAGCCGAATACGGCGCGATATGAAAGC CACTGCACCTCAGATCCCCGTTAGCTGA Protein sequence : MKIGYARVSRADKQDLSMQIQALEKEGCDTIYQDTASAKNTARPQLQEMLRYARQGDEIVVWRLDRLSRSLTDLISLTDD LGARGIGLRSLTEPVYQTSGPMGRVVLQIMAVLAEFERATIIERTKAGLRAAKERGVHVGRPKLLSEDQAAHVVQEIEAG RLTLSEAANLFGVSRSTISRIRRDMKATAPQIPVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 4e-24 | 48 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 4e-24 | 48 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 8e-16 | 43 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 8e-16 | 43 |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 6e-16 | 43 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 2e-19 | 41 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 6e-20 | 41 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 6e-20 | 41 |
| tnpR | ACY75537.1 | TnpR | Not tested | Tn6060 | Protein | 4e-17 | 41 |
| res | YP_005124341.1 | DNA-invertase | Not tested | Not named | Protein | 1e-07 | 41 |
