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Name : lipA (NMCC_0090) Accession : YP_001598266.1 Strain : Neisseria meningitidis 053442 Genome accession: NC_010120 Putative virulence/resistance : Virulence Product : capsule polysaccharide modification protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 88025 - 90139 bp Length : 2115 bp Strand : + Note : Code: M; COG: COG3563 DNA sequence : ATGTTCCTCTTTTCAGACGGCCTACAATCTATTAATAACAATAATCGACGAAAACGCATTGTGAAAAACGCCTACATCCC CTCTCGCGGCATCCGCAAAATCCCCCATCTCTCCACCCTATTGCCCGAGTTTCATATCTACAAAGACGGAAAAGGAGCAG AGGCTGTTGTCGGCTGGGGTTTGCGCCCGACGACACACAAAGCGCGTGCTTTTGCCACCGAACACCAGCTTCCCTTTATT GCTTTGGAAGACGGCTTTTTACGCTCGCTCGGACTGGGCGTCTCCGGTTATCCCCCCTACTCCATCGTCTATGACGACAT CGGCATCTACTACGACACTACCCGCCCTTCTCGTTTGGAACAACTGATTCTTGCCGCCGATACCATGCCGTCTGAAACCT TGGCTCAGGCGCGGCAGGCGATGGATTTCATCCTGCAACACCATCTGTCCAAATACAACCACGCGCCCGAACTTTCAGAC GATCATCCTTTACGCTCCCCATCCAAGTCTGAAACCGTCCTCATTATCGACCAAACCTTCGGCGATATGGCTATCCAATA TGGCGGTGCAGACGCCTCTACGTTTGAATTGATGTTTCAGACGGCCTTAAATGAAAACCCGCAAGCCGATATTTGGGTCA AAACCCATCCCGATGTTTTGTGCGGCAAAAAACAAGGCTATCTGACCCAGCTTGTGCAGCAACACCGCGTCCATCTTCTG GCAGAAGACATCAATCCGATTTCTTTGTTGCAAAACGTCGATAAAGTTTATTGCGTTACCTCGCAAATGGGTTTTGAGGC GCTTTTGTGCGGCAAGCCGCTGACCACTTTCGGCCTGCCGTGGTATGCCGGATGGGGCGTGAGTGACGACCGCCACCCAA AAATCGGCAGCCTTATTCAAACCCAACGCCGCGCCCCCCGCAACTTGCTGCAACTCTTCGCCGCAGCCTATCTGCAATAC AGCCGCTACCTCAATCCCAATACCGGCGAAGCAGGCAGCCTCTTTGATGTCATCGACTATCTGGCGACGGTCAAACGTAA AAACGACAAATTGCGTGGCGAGTTATATTGCGTCGGTATGTCTTTGTGGAAACGCGCGGTTGCCAAACCGTTCTTTAACG TACCCTCTTGCCGTCTGAAATTTATCTCTTCCACCCAAAAACTGGCAAGGGTCAAACTGTCCGACGATGCACGCATCCTG GCTTGGGGCAACGGCAAAGAGGCCATCGTCCGCTTTGCCGAACAACACCACATCCCCCTGCTGCGCATGGAAGACGGCTT TATCCGCTCGGTCGGACTCGGCTCCAACTTAGTGCCGCCGCTGTCGCTCGTTACCGACGATATGAGCATTTATTTCAATG CCGAAACCCCGTCCCGTCTTGAATACATCCTACAAAACCAAAACTTCGACGATCAAGACTTTCAGACGGCCTTGAAGCTG CAAAAAATGCTGACCGAAAACCACATCAGTAAATACAACGTCGGCAGCTCAGACTTCACCGCCCCGTCAACCGACAAAAC CGTGATCCTCGTTCCCGGCCAGGTTGAAGATGATGCGTCTATCCGCTACGGTTCGCCCCAAATCTACCGCAATCTGGATT TGCTCCGTACCGTACGCGAACGAAACCCCAATGCCTATATCATCTACAAACCGCATCCCGATGTAGTCAGCGGTAACCGC ATCGGCCATATTTCCCCTGAAGATGCTGCACGATATGCCGACCAAACCGCCGAGCAAACCGACATCCTGACCTGTCTCCA ATACGCAGACGAAGTACATACCATGACTTCGCTGACCGGTTTTGAAGCCTTGTTGCGCGGCAAAAAAGTCAGCTGCTACG GCCTGCCTTTTTACGCAGGCTGGGGACTTACCCAAGATCTGCTCCCCATTCCGCGCCGTAGCCGCAGACTTGAGCTTTGG CAGCTGATTGCCGGCACGCTCATCCACTATCCCGACTACATCCACCCCGAAACCCATCAGGCCATAAATGCAGAAACCGC AGCCCAAATCCTGATACGACAAAAAAATATGCAAAAAAACAACAACGGATTACATCGCGGGTACTTTGCCAAAAAATTAG GTAAAATCAAACAACTATATCGATCTTTCAAATAA Protein sequence : MFLFSDGLQSINNNNRRKRIVKNAYIPSRGIRKIPHLSTLLPEFHIYKDGKGAEAVVGWGLRPTTHKARAFATEHQLPFI ALEDGFLRSLGLGVSGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQARQAMDFILQHHLSKYNHAPELSD DHPLRSPSKSETVLIIDQTFGDMAIQYGGADASTFELMFQTALNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLL AEDINPISLLQNVDKVYCVTSQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIGSLIQTQRRAPRNLLQLFAAAYLQY SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARIL AWGNGKEAIVRFAEQHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQDFQTALKL QKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNR IGHISPEDAARYADQTAEQTDILTCLQYADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELW QLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 0.0 | 98 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 7e-134 | 49 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 5e-134 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lipA | YP_001598266.1 | capsule polysaccharide modification protein | VFG0259 | Protein | 0.0 | 98 |
| lipA | YP_001598266.1 | capsule polysaccharide modification protein | VFG0704 | Protein | 5e-157 | 58 |
| lipA | YP_001598266.1 | capsule polysaccharide modification protein | VFG0692 | Protein | 3e-180 | 58 |
