Gene Information

Name : ctrC (NMCC_0081)
Accession : YP_001598258.1
Strain : Neisseria meningitidis 053442
Genome accession: NC_010120
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 79518 - 80243 bp
Length : 726 bp
Strand : +
Note : Code: GM; COG: COG1682

DNA sequence : 
ATGCGGGAAATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATT
CGTTATCGTCTTGATGTGGAAATTTTTAAAGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCT
ATCCGATGTTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCAC
CGCAATGTAAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGAT
TATGGCGGTATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGG
CTTTTTTTGCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACA
TTGACTTTTGTGATGATGCCGTTATCCGGTGCGTTCTTTTTTGTGCATAATTTGCCGCCCAAGGTACAAGAATATGCATT
AATGATTCCGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTT
GGTATATCGTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCG
CAATGA

Protein sequence : 
MREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLLYH
RNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWGT
LTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEP
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 2e-103 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrC YP_001598258.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 1e-103 99
ctrC YP_001598258.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 8e-79 70
ctrC YP_001598258.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 8e-79 70
ctrC YP_001598258.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 8e-41 43