Gene Information

Name : synX (NMCC_0078)
Accession : YP_001598255.1
Strain : Neisseria meningitidis 053442
Genome accession: NC_010120
Putative virulence/resistance : Virulence
Product : polysialic acid capsule biosynthesis protein SynX
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0381
EC number : -
Position : 75820 - 76974 bp
Length : 1155 bp
Strand : -
Note : Code: M; COG: COG0381

DNA sequence :
ATGCCTATAGATTCTAAAATCATGAAAAGAATTCTTTGCATTACAGGTACCAGAGCCGACTTCGGCAAGCTAAAACCTTT
ATTAGCCTATATTGAAAATCACCCAGACCTTGAATTGCATTTGATTGTAACTGGTATGCATATGATGAAAACATATGGCA
GAACCTGCAAGGAAGTAACTCGAGAAAACTATCAACATACATATCTGTTTTCAAATCAAATCCAAGGTGAACCAATGGGT
GCCGTTTTAGGCAATACCATTACGTTTATCTCTCGTCTATCTGATGAAATTGAACCTGATATGGTCATGATTCACGGCGA
CCGTTTAGAAGCACTAGCAGGCGCAACTGTAGGTGCATTAAGCAGCCGTTTAGTTTGCCATATCGAAGGTGGTGAACTAT
CTGGTACAGTAGATGACTCCATTCGTCATTCTATTAGTAAACTTTCTCATATCCACTTGGTAGCAAATGAACAAGCTGTC
ACTCGCCTAGTGCAAATGGGAGAAAAAAGAAAGCATATTCACATCATCGGCTCCCCCGATTTAGATGTTATGGCCTCTTC
CACCCTCCCATCCTTAGAAGAAGTCAAAGAATATTACGGTTTACCATACGAAAATTATGGTATTTCTATGTTTCACCCCG
TGACTACAGAAGCACATTTAATGCCACAATATGCGGCCCAATATTTCAAAGCATTAGAATTAAGTGGCCAAAATATCATT
AGCATCTACCCTAATAATGACACTGGCACTGAAAGTATTCTGCAAGAATTATTAAAATATCAATCTGATAAATTTATTGC
ATTTCCTTCCATTCGATTTGAATATTTTTTAGTCTTATTGAAACATGCTAAATTTATGGTCGGCAACTCAAGTGCAGGTA
TTAGAGAAGCTCCTCTCTACGGTGTCCCTTCAATTGATGTTGGTACACGCCAAAGTAACCGCCATATGGGAAAATCTATT
ATTCATACAGATTATGAAACTAAAAATATCTTTGATGCGATTCAACAAGCATGCAGTTTAGGCAAATTTGAAGCAGATGA
TACCTTTAATGGCGGAGATACTCGCACCAGCACAGAAAGATTTGCTGAAGTAATCAACAATCCTGAAACGTGGAATGTTT
CTGCTCAAAAACGTTTTATCGATTTGAATCTTTAA

Protein sequence :
MPIDSKIMKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKTYGRTCKEVTRENYQHTYLFSNQIQGEPMG
AVLGNTITFISRLSDEIEPDMVMIHGDRLEALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAV
TRLVQMGEKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYAAQYFKALELSGQNII
SIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHAKFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSI
IHTDYETKNIFDAIQQACSLGKFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
synX NP_273134.1 polysialic acid capsule biosynthesis protein SynX Not tested IHT-A Protein 1e-179 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
synX YP_001598255.1 polysialic acid capsule biosynthesis protein SynX VFG0254 Protein 5e-180 99