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Name : pilB (COXBURSA331_A0247) Accession : YP_001596124.1 Strain : Coxiella burnetii RSA 331 Genome accession: NC_010117 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly protein PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 214424 - 215974 bp Length : 1551 bp Strand : - Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157 DNA sequence : ATGCAAACTAAGGTCGAGGGCCTCGCTCATATTTTATTGCAGACAAATGCGTTAACTAACAGCCAAATTGCCCGTGCTAT TGAACAGGCGGCGGGAGCACAATCACCGTTGCTGCATTATTTAGTTACCGAGAAAATAGTATCCTCAGAAAAAATAGCAG AAGCCTGCGCCACTTACTTTGGTTTAGAAGCGATTAACTTGCAGACTCAACCACTGAACCCATCGCTTTGTCATGAAATA CCACGGAAATATTTAATGCGCTATGCGTTCATTCCACTTGCAGTAAAATCACCTACGCTAGCTATTAGCGATCCGCTATA TTTTCCCTTAATCGAAGAGCTCCAGTTTCAGACTAATAAACAATACAAAATTGTTTTTGCTCCCTATAAATCATTTGCTG CGTTAATAAATAATTTTGTGAGTCGTCAAATTTACGAGACAGTTTCACAAGGTGAAGCTTCCATTGTTGAGTTAGTAAAT CAAGTGCTCACGGATGCCATCTATCGAGAAGCGTCAGATGTTCACTTTGAACCGATGCAACAACATTACCGAATTCGGAT GTGTATCGATGGGATTTTACATACTACTCTCTTGCCAAATACACAGTCGCCAGCAATGAGTAGCCGGTTAAAAGTACTGG CTGAATTAGATATTTCTGAAAAACGCTTGCCGCAGGATGGGCGCTTTTATTTTACAACGCTTACCCATCTTAAACGTGAC TGCCGACTTAGTAGCTGCCCGACTTTATTCGGGGAAAAAATCGTCATCCGTTTACTAAACCCCGTTCATCATTTATTAAA ATTTGAAGAGTTGGGTTTAGAAGAAAAACCGAAGCAACTCATCATGAAAAAAATCAAACAACTCCAAGGTTTGATTCTTG TCACAGGACCCACGAGAAGCGGGAAAACGGTTTCACTGTATGCCGCGCTTAATCAGATTAATTCAACTCAAAAAAATATC TCCACCGTAGAAGATCCCATTGAAATACAATTAGCCGGGGTTACCCAAGTTAATATTCGCCCAAAAGCCGGACTTAATTT CGCCGCTGTATTACGCGTTTTTTTGCGCCAAGATCCTGATGTTATCATGGTGGGGGAAATTCGCGATTTTGAAACTGCTT CCATTGCTGTTCGCGCTGCACATACCGGGCATTTAGTCTTATCCACCTTACATACCAATAGCGCCGTCGAATGCATTACA CGATTAATCGATATGGGGATCGAGCCATTCAACCTTGCTAGCGTATTAAAGCTCGTGGTTGCTCAGCGACTCGTCAGACA GCTTTGCGCTCATTGCCAAGCAACGAAGATTTCCTGCCCCTTTTGTTTAAACGGATACCAGGGGCGTACGGGAATCTATG AAGTTCTGCCTATTACTCCTTCCATTATCGAACTTATTTTACAAAAACGATCCGCGCAAGAAATTAATGCCTGCGCCATA CAAGAGGGCATGCAAACTTTGTGGCAAGCAGCTTTGAATAAAGCAAAGACGGGTATTACAAACCTCAACGAAATTTACCG CGTGATTCAATCTGAAAATAACTATGCTTAA Protein sequence : MQTKVEGLAHILLQTNALTNSQIARAIEQAAGAQSPLLHYLVTEKIVSSEKIAEACATYFGLEAINLQTQPLNPSLCHEI PRKYLMRYAFIPLAVKSPTLAISDPLYFPLIEELQFQTNKQYKIVFAPYKSFAALINNFVSRQIYETVSQGEASIVELVN QVLTDAIYREASDVHFEPMQQHYRIRMCIDGILHTTLLPNTQSPAMSSRLKVLAELDISEKRLPQDGRFYFTTLTHLKRD CRLSSCPTLFGEKIVIRLLNPVHHLLKFEELGLEEKPKQLIMKKIKQLQGLILVTGPTRSGKTVSLYAALNQINSTQKNI STVEDPIEIQLAGVTQVNIRPKAGLNFAAVLRVFLRQDPDVIMVGEIRDFETASIAVRAAHTGHLVLSTLHTNSAVECIT RLIDMGIEPFNLASVLKLVVAQRLVRQLCAHCQATKISCPFCLNGYQGRTGIYEVLPITPSIIELILQKRSAQEINACAI QEGMQTLWQAALNKAKTGITNLNEIYRVIQSENNYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-57 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-57 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_001596124.1 | type IV-A pilus assembly protein PilB | VFG2426 | Protein | 6e-64 | 44 |
| pilB | YP_001596124.1 | type IV-A pilus assembly protein PilB | VFG0233 | Protein | 1e-61 | 44 |
| pilB | YP_001596124.1 | type IV-A pilus assembly protein PilB | VFG2048 | Protein | 1e-58 | 43 |
| pilB | YP_001596124.1 | type IV-A pilus assembly protein PilB | VFG0182 | Protein | 3e-57 | 43 |
| pilB | YP_001596124.1 | type IV-A pilus assembly protein PilB | VFG1876 | Protein | 3e-57 | 42 |
| pilB | YP_001596124.1 | type IV-A pilus assembly protein PilB | VFG0112 | Protein | 6e-75 | 41 |
