Gene Information

Name : hpaE (BCAN_B1192)
Accession : YP_001595090.1
Strain :
Genome accession: NC_010104
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1160055 - 1161569 bp
Length : 1515 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAAGCTCGACGACAATGTCGCCAAAGCAAAAACCTATCTTGCCCGGTTTGAAAAAGGGGTTCTGAACCGCATTGG
CGGTGAAGACGTGGCCGCTGCCGATGGCGCGACTTTCGAGACGATTTCGCCGGTGGACCTGAAGCCGCTTGCAATCGTGG
CGCTTGGCAAGGCAGCGGATATCGACCGTGCTGCCAGGGCGGCAAAGGCCGCCTTTCCCGAATGGGCCGCAATGTCGGGC
GATGCGCGCAAGAAGCTCCTGCACAAGATTGCCGATGCCATTGTCGCCCGTGCCGAGGAAATCGCCTTCGTGGAATGCAT
GGATACGGGCCAGTCGCTGAAATTCATGGCCAAGGCGGCACTGCGCGGCGCGGAAAATTTCCGCTTCTTCGCAGACCGTG
CACCGGAAGCCCGCGACGGCAAGACGCTTCGCGGCCCCGGCCAGGTCAATATGACAACCCGTGTACCCATCGGGCCGGTC
GGCGTCATCACGCCGTGGAACACGCCTTTCATGCTGTCGACATGGAAGATCGCTCCGGCACTTGCGGCAGGATGCACCGT
GGTTCACAAGCCGGCTGAATTTTCACCGCTGACGGCGCGCCTGCTCGTTGAAATTGCCGAGGAAGCCGGTCTGCCGAAAG
GCGTATGGAACCTCGTCAATGGCTTCGGGGAAGATGCGGGCAAGGCCCTGACCGAGCATCCCGACATCAAGGCCATCGGC
TTTGTGGGCGAAAGCCGCACAGGCTCGCTCATCATGAAGCAGGGGGCGGATACGCTGAAGCGTGTGCATTTTGAGCTTGG
CGGCAAAAACCCGGTGGTCGTCTTTGCCGATGCCGATCTGGAGCGCGCTGTCGATGCCGCCGTCTTCATGATCTATTCGC
TGAATGGTGAACGCTGCACGTCTTCCTCGCGCCTGCTGGTGGAAGCAAGCATCTATGAAAAATTCACCGCGCTGGTCGCT
GAAAAGGCAAAGCGTATCAAGGTCGGCCATCCGCTCGATCCTGAAACGGTTGTTGGCCCTCTGATCCATCCGGTTCATGA
AAAGAAAGTGCTGGAATATATCGAGATCGGCCGCAGCGAAGGCGCGACGGTTGCCGCAGGCGGCGCAAAATTCGCAGGGC
CGGGCGGTGGCTGCTATGTGTCGCCGACACTTTTCACCGCCGCCCACAACGGCATGCGCATCGCGCAGGAGGAGATTTTC
GGCCCGGTTCTGACCGCCATTCCTTTCAAGGACGAGGCCGAGGCGCTGGCGCTTGCCAATGATGTGAAGTACGGCCTGAC
CGGCTATCTATGGACCAATGACGTGACCCGCGCTTTCCGTTTCACCGATGCGCTGGAAGCCGGAATGATCTGGGTCAACT
CGGAAAATGTGCGCCATCTGCCAACGCCATTCGGCGGCGTGAAGAATTCCGGCATCGGCCGCGACGGCGGCGACTGGTCG
TTCGATTTCTACATGGAAACCAAGAATATCGCCTTCGCCAACGCTGCGCACGCGATTGCAAAACTCGGCGGCTGA

Protein sequence :
MSKLDDNVAKAKTYLARFEKGVLNRIGGEDVAAADGATFETISPVDLKPLAIVALGKAADIDRAARAAKAAFPEWAAMSG
DARKKLLHKIADAIVARAEEIAFVECMDTGQSLKFMAKAALRGAENFRFFADRAPEARDGKTLRGPGQVNMTTRVPIGPV
GVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEFSPLTARLLVEIAEEAGLPKGVWNLVNGFGEDAGKALTEHPDIKAIG
FVGESRTGSLIMKQGADTLKRVHFELGGKNPVVVFADADLERAVDAAVFMIYSLNGERCTSSSRLLVEASIYEKFTALVA
EKAKRIKVGHPLDPETVVGPLIHPVHEKKVLEYIEIGRSEGATVAAGGAKFAGPGGGCYVSPTLFTAAHNGMRIAQEEIF
GPVLTAIPFKDEAEALALANDVKYGLTGYLWTNDVTRAFRFTDALEAGMIWVNSENVRHLPTPFGGVKNSGIGRDGGDWS
FDFYMETKNIAFANAAHAIAKLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-85 46
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-67 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaE YP_001595090.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 4e-66 41