Gene Information

Name : copR (BCAN_A0628)
Accession : YP_001592474.1
Strain :
Genome accession: NC_010103
Putative virulence/resistance : Virulence
Product : transcriptional activator protein copR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 600391 - 601098 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTCTCGTTATCGAAGATGACCGCGAAGCGGCCCGTTATCTGGAAAAGGCCTTTGCCGAGGCAGGGCATTCGGC
CGATATCGCGGGCGACGGCGAAACCGGCTACGCACTTGCCGAAAACGGCAATTACGATGTGCTGGTGGTGGACCGTATGC
TGCCCAAACGCGACGGCCTTTCCGTTGTGGCGGGCCTGCGCGCCAAGGGCATGGAAACGCCGGTCCTGATCCTGTCGGCG
CTTGGCGAGGTGGATGACCGCGTGACCGGCCTGCGCGCTGGGGGCGATGATTATCTCACCAAGCCCTATGCTTTTTCCGA
ACTTCTGGCGCGTGTCGAGGTCTTGCAGCGCCGCTCAAGCCCGCGCGAGGCGGATACGATCTACCGCGTCGGCGATCTGG
AGCTTGACCGCCTTGCGCATACTGCGCGCCGCCAGAGTGTTGATATTACGCTTCAACCGCGAGAATTTCGTCTTCTCGAA
TATCTCATGCGCCATGCCGGGCAGGTCGTCACCCGCACCATGCTGCTTGAAAACGTCTGGGATTACCACTTCGACCCGCA
GACCAATGTGATCGATGTTCACATTTCGCGGCTGCGCTCCAAGATTGAAAAGGGCTTTGACGAGCCGCTGCTTCATACGG
TGCGCGGGGCTGGCTATATGCTGAAGGCGGGCCGGGGCAAGCAATCCGCTGCCGCAAGGGCGGAATGA

Protein sequence : 
MKILVIEDDREAARYLEKAFAEAGHSADIAGDGETGYALAENGNYDVLVVDRMLPKRDGLSVVAGLRAKGMETPVLILSA
LGEVDDRVTGLRAGGDDYLTKPYAFSELLARVEVLQRRSSPREADTIYRVGDLELDRLAHTARRQSVDITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDEPLLHTVRGAGYMLKAGRGKQSAAARAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_001592474.1 transcriptional activator protein copR BAC0125 Protein 2e-51 48
copR YP_001592474.1 transcriptional activator protein copR BAC0083 Protein 1e-46 48
copR YP_001592474.1 transcriptional activator protein copR BAC0197 Protein 2e-45 47
copR YP_001592474.1 transcriptional activator protein copR BAC0111 Protein 1e-54 45
copR YP_001592474.1 transcriptional activator protein copR BAC0347 Protein 7e-48 45
copR YP_001592474.1 transcriptional activator protein copR BAC0308 Protein 2e-46 44
copR YP_001592474.1 transcriptional activator protein copR BAC0638 Protein 5e-38 44
copR YP_001592474.1 transcriptional activator protein copR NC_002516.2.879194.p Protein 7e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_001592474.1 transcriptional activator protein copR VFG1389 Protein 4e-36 45
copR YP_001592474.1 transcriptional activator protein copR VFG0596 Protein 2e-38 41
copR YP_001592474.1 transcriptional activator protein copR VFG1390 Protein 1e-38 41