Gene Information

Name : SPAB_00860 (SPAB_00860)
Accession : YP_001587117.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 788733 - 789464 bp
Length : 732 bp
Strand : -
Note : KEGG: eci:UTI89_C3737 3.0e-07 yhdM; Zn(II)-responsive regulator of ZntA; COG: COG0789 Predicted transcriptional regulators; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGGCGCTTTACACAATTGGTGAAGTGGCTTTGCTTTGTGATATCAATCCTGTCACGTTGCGCGCGTGGCAGAGACGTTA
TGGACTTTTAAAACCACAGCGAACGGATGGCGGTCATCGTCTGTTTAACGATGCCGATATCGACAGAATCCGCGAAATCA
AGCGCTGGATAGATAACGGCGTCCAAGTCAGCAAAGTCAAAGTGCTGCTCAGTAGCGACAGTAGCGAACAACCTAACGGC
TGGCGCGAACAGCAGGAGATCCTGCTGCACTACCTGCAAAGCAGTAATCTGCACAGTTTACGGTTATGGGTCAAAGAACG
CGGTCAGGATTATCCAGCCCAAACATTGACCACTAACCTGTTCGTCCCGCTGCGGCGACGATTACAGTGCCAACAACCCG
CCCTTCAGGCGCTGCTCGGCATTCTTGACGGTATCCTGATCAACTATATTGCGCTCTGCCTGGCGTCTGCGCGTAAGAAA
CAGGGAAAAGATGCGTTGGTGATCGGCTGGAATATCCATGATACCACCCGCCTGTGGCTGGAAGGTTGGGTCGCCAGCCA
ACAGGGATGGCGAATCGACGTGCTGGCGCACTCGCTTAGCCAGTTTCGCCCGGAACTGTTTGACGGCAAGACGTTACTGG
TATGGTGCGGAGAAAACCAGACGCTGGCGCAGCAGCAGCAACTCCTGGCATGGCGCGCCCAGGGACGCGACATTCATCCC
CTTGGCGTTTAA

Protein sequence : 
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNG
WREQQEILLHYLQSSNLHSLRLWVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKK
QGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGENQTLAQQQQLLAWRAQGRDIHP
LGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 6e-34 45
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 4e-34 45
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-34 44
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-34 44
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 8e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_00860 YP_001587117.1 hypothetical protein VFG0491 Protein 2e-34 45