Gene Information

Name : SPAB_05420 (SPAB_05420)
Accession : YP_001591526.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 4558050 - 4559339 bp
Length : 1290 bp
Strand : -
Note : KEGG: ecj:JW3469 1.6e-211 arsB; arsenite/antimonite transporter K03893; COG: COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; Psort location: plasma membrane, score: 23

DNA sequence :
ATGTTACTGGCAGGTGCAATTTTTATCCTGACCATTGTTCTGGTTATCTGGCAGCCGAAGGGATTGGGGATCGGCTGGAG
CGCTACACTGGGCGCAGTACTGGCTATGGTTTCTGGTGTTGTTCACGTTGGCGATATCCCGGTAGTGTGGAATATCGTCT
GGAACGCCACGGCAACGTTTATCGCCGTTATTATCATCAGTCTGCTTCTGGATGAATCCGGCTTTTTCGAATGGGCTGCG
CTGCACGTTTCACGCTGGGGTAATGGTCGTGGCCGTTTGCTGTTTACGTATATTGTTCTGCTCGGTGCTGCGGTAGCGGC
ACTGTTCGCCAACGATGGCGCAGCACTTATTCTGACGCCGATCGTTATTGCCATGCTGTTGGCATTAGGATTTAGCAAAG
GCACCACACTGGCATTCGTGATGGCCGCCGGGTTTATTGCCGATACCGCCAGCCTGCCGTTGATTGTGTCGAACCTGGTA
AATATCGTCTCTGCCGATTTCTTCGGCCTGGGATTTAGCGAATATGCCTCGGTGATGGTTCCGGTCGATATAGCAGCCAT
TGTTGCTACGCTGATCATGCTGCATCTGTTCTTCCGTAAAGATATCCCGCCGACTTACGATTTGGCCCTTCTGAAAGCAC
CGGCAAAAGCGATTAAAGATCTGGCAACGTTCAGAACAGGCTGGATAGTTTTGATTCTTCTGCTGGTTGGCTTTTTCGTC
CTGGAACCCCTCGGTATTCCGGTCAGCGCGATTGCTGCTGTAGGGGCTGTCATCCTGTTTGCAGTGGCGAAACGAGGCCA
TGCCATTAATACAGGCAAAGTACTACGCGGTGCGCCATGGCAGATAGTTATCTTCTCACTGGGGATGTATCTGGTGGTCT
ATGGTCTGCGCAACGCCGGGCTAACGGAATACCTCTCCGGTGTGCTGAATGTGCTGGCGGATAAAGGCCTTTGGACCGCG
ACGTTTGGCACCGGCTTCCTGACTGCTTTCCTGTCTTCCATCATGAACAACATGCCTACCGTACTGGTTGGTGCGCTGTC
TATCGATGGCAGTACCGCAACAGGCGTTATCAAAGAGGCAATGATTTATGCCAACGTGATTGGCTGCGATCTGGGACCGA
AAATCACACCTATCGGCAGCCTGGCAACGCTGCTCTGGCTGCATGTACTTTCACAGAAGAACATGACCATCACGTGGGGA
TACTATTTCCGCACCGGGATTATCATGACGCTGCCTGTGCTGTTTGTAACGCTGGCCGCGCTGGCGCTACGTCTCTCTTT
CACTTTGTAA

Protein sequence :
MLLAGAIFILTIVLVIWQPKGLGIGWSATLGAVLAMVSGVVHVGDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA
LHVSRWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFGLGFSEYASVMVPVDIAAIVATLIMLHLFFRKDIPPTYDLALLKAPAKAIKDLATFRTGWIVLILLLVGFFV
LEPLGIPVSAIAAVGAVILFAVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADKGLWTA
TFGTGFLTAFLSSIMNNMPTVLVGALSIDGSTATGVIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRTGIIMTLPVLFVTLAALALRLSFTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-150 95
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-89 60
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 5e-87 59
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-91 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_05420 YP_001591526.1 hypothetical protein BAC0578 Protein 3e-154 98
SPAB_05420 YP_001591526.1 hypothetical protein BAC0576 Protein 2e-154 98
SPAB_05420 YP_001591526.1 hypothetical protein BAC0031 Protein 5e-151 93
SPAB_05420 YP_001591526.1 hypothetical protein BAC0577 Protein 3e-146 91
SPAB_05420 YP_001591526.1 hypothetical protein BAC0574 Protein 2e-89 60
SPAB_05420 YP_001591526.1 hypothetical protein BAC0575 Protein 2e-91 59