Gene Information

Name : SPAB_05392 (SPAB_05392)
Accession : YP_001591498.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4535677 - 4537071 bp
Length : 1395 bp
Strand : +
Note : COG: NOG06092 non supervised orthologous group; Psort location: extracellular, including cell wall, score: 9

DNA sequence :
ATGAAAAAAGCAGGACTTTTACTGATTTTTGCCTCGTTGCCAGCAATGGCAGCTGATATCTCTTTGTCTTCATCGGGGGC
GTCAGTGAGCGGTAACGCTATCAGCGATGGGCTCTTTTATTCTATTGGTGGCGGTTCGGTTATTTCACCCCCGCCTAGTC
GTAACAATATGTCCAGGATAGGCATTAATGGTGGCCTTAGCAGTGATCTGATGTGTGGCAATTTCGACATCAAAACAACC
GTTGGCAACCAGCTGAATGGTATTACCAGCGGGTTTAAGGATCTGATGGGGAATGTGATTCAGGGGGCGACTGGTGCTGT
CATGAGTATGCCGGCAATGGCTATTCAGCGCGCAAACCCCGGGCTGTATGAAATGCTCACCAATGGCGTTCTGCAGGCCG
GTTTGAGCTTTGATAAAGCGATGTTGAACTGTCAGAGCATGTCGAAGAAGCTGGCTGATTATACCATTGGCAATAAATGG
CAGCAGGTAGCCGTCTCTGAAGAGTACAAAGATATTGTGGCCACAAGTGGTGGCGATGCGGTTTCCAGCGACCAGAAACT
GCAAAAAGCAACTGGAGAGGAAGGCGTGACGTGGGTCGGTGGGCAGAAAAGGGGAGGTAAGGGGCAGCCCGCAATTCAAC
CCACTCGGGATCTGGCCAAAGCTGGTTATAACATGATGAATAATTTGCCAGTGACCAGTAACAGCAGCGTCGGCTCCTCG
AGCTGCAATGGTACCGCATGCCAACGTTATAAATCTTCTGAAGAGGCCGCAGCGGCCGTTGTTAAAGTGCTTGGTGATCG
CTCCATCAGGACTTGCCGGGAAACCAGTGAATGTACCAGTGGTGGAACCGATAACCAGCCGGGCAGTGCTGTCGCTGGTA
CTGGCTTTTCTCCCATCCTTGAGGATGCCACGAAAGAGAATCTGGAGCAGCTTAGTAAGCTGGTTAGTGGTGAACTGCAG
CCCACCACTGATAACCTTTCCGCACTGAAAACCGGCAGTCTGGTTGTCACCCGCGGGGTAATTCAGGCATTACGTGACGA
TCCAGACAAAGCGGCCCTGGTTCAACGGCTTGCCGGCGAACTGGCGATGTCCGACACCGTTGAAACCGCGCTAACAATGC
GCAGGATGCTCACCACCGGTGAATCCGAACCTAATGCTGCAGAGCAGCCGGAAGCTATTGCCGAGGGTGATCGCCGCATC
GATGCCCTCGATCGCGAGCTGACGGCGCTGCGTAATGAGATGGAGTTACGCAAATCTATCAGCAATAACAGCCTGCTGAC
GGCACTGGAACGGCAGGGAACAAGGAATCAGGATAACCGTCTGCAGCAGAAAGCCGGTAACGAGGACCAGGGCTTCAGCC
AGATGGGCCAGTCTCAGTCTTCCGGAGCAAACTGA

Protein sequence :
MKKAGLLLIFASLPAMAADISLSSSGASVSGNAISDGLFYSIGGGSVISPPPSRNNMSRIGINGGLSSDLMCGNFDIKTT
VGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLSFDKAMLNCQSMSKKLADYTIGNKW
QQVAVSEEYKDIVATSGGDAVSSDQKLQKATGEEGVTWVGGQKRGGKGQPAIQPTRDLAKAGYNMMNNLPVTSNSSVGSS
SCNGTACQRYKSSEEAAAAVVKVLGDRSIRTCRETSECTSGGTDNQPGSAVAGTGFSPILEDATKENLEQLSKLVSGELQ
PTTDNLSALKTGSLVVTRGVIQALRDDPDKAALVQRLAGELAMSDTVETALTMRRMLTTGESEPNAAEQPEAIAEGDRRI
DALDRELTALRNEMELRKSISNNSLLTALERQGTRNQDNRLQQKAGNEDQGFSQMGQSQSSGAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 1e-162 87
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 1e-143 79
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 2e-144 79
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 1e-144 79
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 1e-127 69
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 1e-127 69
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 5e-118 60
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-69 44
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-66 42
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-64 41