Gene Information

Name : SPAB_05384 (SPAB_05384)
Accession : YP_001591490.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4528602 - 4530128 bp
Length : 1527 bp
Strand : +
Note : KEGG: cal:orf19.4072 2.3e-06 HYR10; similar to cell surface flocculin K01186; COG: NOG06300 non supervised orthologous group; Psort location: nuclear, score: 23

DNA sequence :
ATGAAAAAGCCTGCTTCAAACCTGCTTGTGAAAATTGCGGTTCCCGTCGTAGTGGTGGGCGCCATCATGATTGGGGTTAA
ATCCTGTACAGATAAAAACGATAAAAATGAAGCAGGCCAGAAAACCTCTAATGTCGCCCTTAAGGATCTGACACCAGAAG
ATCTCAAAGCGTTGGGTGTGGAAGGTGACACCGCGCAGGATACTTTGCGTACCCTGGTTGGTAGTTACCGTAAGGTTCAG
GGGCGGCTTGACAGCCTTGAAAGCGATAATAAAACACTTGCTGATGAAAATAAGGAGCTGAAAAAAAACAATACCAATGT
TGATCAGCAAATCAGCCAGGCTGTGGGGCAAGTTCGTTCCGAAGAGGCCCAAAAACGTGCACAACTGAGTTCTCAGGTTA
CTGATCTGAGCTCGCAGGTGAACCAACTTCTTGATCAACTCAAAAATGGGTCCTCCGGCTTAACGGCAGGAAATAAAGGT
AACGCTGCAGGCAGCGATATTCCTGTGGGACTGGGTTATGACAATGGTCTGACCGGAGGCGCGGGAAATATATCTCAAAC
AGATGGAAACGGGTTGCAATGGGTTGAGCCGAAAGATGGTATTGCCACGGATGCGAACGGTCGACCGGTCTCAGATAAAA
ACAGTAATAACGCGACTGGTTTTTCTTTTGCCACCTCCTTTGGCGCTGCAGGTGATGCAGCCAGGCAGGCTACGTCAGCA
GTAAGTACAACGGTACAGAACAACATTCCCGGATCTGAAAAAAATGCCGCCCCTGTTTATACCCTTCCGGAAAACTCCAC
GCTTGTGGGTAGTCGGGCCATGACCGCGCTGTTGGGACGTATTCCCATTGATGGCAAGGTGACTGACCCTTACCCGTTCA
AAGTGATGATCGGAAAAGACAACCTGACGGCAAATGGCATTGAATTGCCTGATGTACAGGGGGCGATCGTTTCGGGAACC
GCTACGGGGGACTGGACGCTTTCCTGCGTGCGTGGCGCCATAACCAGCATCACTTTTGTTTTTACTGATGGCACTGTTCG
TACGCTTCCTTCACCTGAGGGGCAAGGCAGTAATGGTGGTAATCAGAACAGCCAGGGTGGGAATAACAGCAGTATTGGCT
GGTTGTCAGATGACAACGGCATTCCATGCATTTCGGGTACCCGAAAATCAAACGCTTCTACTTATCTGCCAACCATTGCC
GCACTTGCAGCTGCCAGCGCAGCTGGTGATGCCGTGGCCGAAAACCAGAATACCAGCCAGACCAATGGCTATGGTGGTGT
GACGTCAACGCTGACGGGGGATGCCGGTCAGGCTGTGTTGGGTAAGGCGTTATCAGGCGGTATGCGTGAGACCGTTGACT
GGGTTAAAGCGCGATATGGTCAGACGTTTGACGCGATCTATGTACCGCCTGGACAGAAAGTGGCTTTACATATCACTCGT
CAGCTGGCGATTGATTATGAAGAAAAAGGCCGCAAGGTGAAATATGACGATTTCAGCCTCGCTGGTAGCAGCACGGGCAT
GGATTGA

Protein sequence :
MKKPASNLLVKIAVPVVVVGAIMIGVKSCTDKNDKNEAGQKTSNVALKDLTPEDLKALGVEGDTAQDTLRTLVGSYRKVQ
GRLDSLESDNKTLADENKELKKNNTNVDQQISQAVGQVRSEEAQKRAQLSSQVTDLSSQVNQLLDQLKNGSSGLTAGNKG
NAAGSDIPVGLGYDNGLTGGAGNISQTDGNGLQWVEPKDGIATDANGRPVSDKNSNNATGFSFATSFGAAGDAARQATSA
VSTTVQNNIPGSEKNAAPVYTLPENSTLVGSRAMTALLGRIPIDGKVTDPYPFKVMIGKDNLTANGIELPDVQGAIVSGT
ATGDWTLSCVRGAITSITFVFTDGTVRTLPSPEGQGSNGGNQNSQGGNNSSIGWLSDDNGIPCISGTRKSNASTYLPTIA
ALAAASAAGDAVAENQNTSQTNGYGGVTSTLTGDAGQAVLGKALSGGMRETVDWVKARYGQTFDAIYVPPGQKVALHITR
QLAIDYEEKGRKVKYDDFSLAGSSTGMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 4e-127 59
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 5e-126 59
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 1e-121 58
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 1e-108 54
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 2e-109 54
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 3e-104 50
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 7e-85 45
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-78 43
Pmu_03090 YP_005176208.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 7e-84 42
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-78 41
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 4e-78 41
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-78 41
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-74 41