Gene Information

Name : SPAB_05371 (SPAB_05371)
Accession : YP_001591477.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4520756 - 4521379 bp
Length : 624 bp
Strand : +
Note : COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); Psort location: extracellular, including cell wall, score: 9

DNA sequence :
ATGGCAAATTGCCGCATTCTGAAACTGGCTTGCTGTTTATGGTTTGTCAGCACTGGTTGCCTGGCGGTCGTGAATGTAAA
TAGCAGTGTTCAGGTAGTTCCGCAGGCTTATCGGATCATTGCTGCTGCCGAGCGCGTTCCGGCAGAATCGCTTTACTCGC
TGGCGATGGCCGAAAGCACCCGTAAAACCGCATGGGGGTCTAAACCATGGCCCTGGACTATTAATGTAGCAGGGAAAGGA
TACCACTTTGAAACCCGCGAGGAGGCCTTTGCGGCACTTCTTGGATTTATGCAGCGCTACCCTCTCAAGCGTATCGATGT
CGGTGTAGCCCAGGTCAATCTTGGGTGGAACGGGCATCTTTTCCCATCCTTTCGTGATGCTTTTGATCCCTACACAAATC
TTCGTGCAGCGGCCCGAATTCTCCGTGCCTGCTATGACGCTCAGCCTGGAAGCTGGATTAAAGCTGCTGGCTGTTATCAC
CACCCGGCCGGTGGTAAGCCGGCAGCAAAATATATGGCTATCGTACGCCGTAAGCTAAGTCAGATCGCACCTGATATTAA
GGTCCCTGAAGGGGAGCCGGTTGCTCTGGCCAGTCACTCATTAACCTGGGTTGAACCTCAATGA

Protein sequence :
MANCRILKLACCLWFVSTGCLAVVNVNSSVQVVPQAYRIIAAAERVPAESLYSLAMAESTRKTAWGSKPWPWTINVAGKG
YHFETREEAFAALLGFMQRYPLKRIDVGVAQVNLGWNGHLFPSFRDAFDPYTNLRAAARILRACYDAQPGSWIKAAGCYH
HPAGGKPAAKYMAIVRRKLSQIAPDIKVPEGEPVALASHSLTWVEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 2e-51 66
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 2e-51 60
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 2e-51 60
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 5e-48 56
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 5e-48 56
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 2e-41 53
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 4e-24 51
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-24 51
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-26 51
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 2e-24 47
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 3e-21 42