Gene Information

Name : SPAB_05360 (SPAB_05360)
Accession : YP_001591466.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 4511299 - 4512873 bp
Length : 1575 bp
Strand : +
Note : KEGG: pen:PSEEN2333 5.6e-37 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGTCTCCTGATAAAGAAATCATGGATTTTGTCTTTGCCGAGCAGCATCCGTCTGGAGGGGTTACGCTACTCATCGACGG
CAACCGGCGAAAAGACCCTGGCATACAGCGCTGGGTTATGGATGTCACCCGGACATGGGGTGATGCAAAAACTGAGTTTG
TTACACTCAGCGAACTGAACCGGCGGCGTGAAGTGGCAGAACGTCAGGGCCGTGGGCTTAACCAGGGTGTGAGCGAGGCG
GATCTAAGTAACCGTGACGTCAGTGTGTCGCAGGATAAGGTCATCAGCTATATGAGGCTGGGTAACGACTTTAATGCCTC
TGATATTCATATGGAAATAAGCGGTGATCGCAAGATTTGCATCGTTCAGTTGCGTATTCACGGCGAGCTGGAGGTGGTGG
ATGAAGTGAAAGATGTGGAGGGTATGACGCTGGCCTCCACATCTTATCTTTCCATGTGCGACGTGCGCGAGCAGTCATTC
TTTGCCGGTCGTGAGCAGTCAGGGCGCATCGATGCAAAGTTCGCCCGCCGCGCCGGCCTCTATGGCGCCCGCTACGAACA
CCGTCCTACTCCGGATGGGCTGATAGTGGTCATGCGTTTGATCCCGGATGACGGGGACAATATACCGACGCTGCCGCAAC
TGGGTTTTTTGCCTGAGCAGATTAAGCTCATCATGCAGATCCTGCGTATGCCGGAAGGCATGACGCTGCTGACCGGGCCT
ACTGGTTCAGGGAAGAGCGCTACGCTGCGCGTGTTCAGTGATATCTGGCTGAAACTGACCGGCGGTAAAAAGCGCCTGCT
CACGCTGGAAAACCCGCCCGAGGGGCGTATTCCGGGTGGTATTCAGACCCCCGTTATGCCGGAAGACAATTCACCGGAGG
CCATCAGCCGCGCCTGGAGTAACGGAAACGCCTCTGCACTTCGTCTCGATCCGGATGCCATCCTGAACGGTGAGATCCGT
GACCTGTATTCCCTTCTCGCCGCCATTTTCGCCAGTGAAACCGGCCACCTGGTGCTGTCGACCCTGCACACCCAGAGCCC
TATCGGCTCCCTGCGTCGTATGGAGCATTTCGGTATTGATCGCCACCTTCTGGCGGATGCTGCACTCATCACTGGCCTGA
TTGGCCAGCGTCTGGTGCCGCTGTTGTGTGAACACTGCCGGGTACCGTGGGAAGTCAAAGTCCCTGAGCTTGATGAAGAA
ACCCGCGCGCGTCTCGAAAAATATTGTTCTGTCGCGGGCTTGTGCGAACCGAAAAATCTCTTCTTCCGCAACTATGAGGG
ATGTGAACACTGCCGGAAAACGGTACCACTGACCGGACGCATTATCAGCCGTGGCGTTACAGGGCGAACAGCTATTGCCG
AAGTTGTCCGGACAGATGCTCGCCTGATGCAACTTTGGCTTTCACATGGGCCTTCAGTTGCCAGAAAGTACTGGGTAAAC
CAGGGTGGGATTACTCGCCGCATGCATCTGTTGCGTTATCTGGCAGAGGGTCTTGTTGATCCGCTGGAAGGCGATCTCAT
CTGTCCGCTGGATGAAGATGACATCATGGATTGTGAGGTGCCTGATGGAAAGTGA

Protein sequence : 
MSPDKEIMDFVFAEQHPSGGVTLLIDGNRRKDPGIQRWVMDVTRTWGDAKTEFVTLSELNRRREVAERQGRGLNQGVSEA
DLSNRDVSVSQDKVISYMRLGNDFNASDIHMEISGDRKICIVQLRIHGELEVVDEVKDVEGMTLASTSYLSMCDVREQSF
FAGREQSGRIDAKFARRAGLYGARYEHRPTPDGLIVVMRLIPDDGDNIPTLPQLGFLPEQIKLIMQILRMPEGMTLLTGP
TGSGKSATLRVFSDIWLKLTGGKKRLLTLENPPEGRIPGGIQTPVMPEDNSPEAISRAWSNGNASALRLDPDAILNGEIR
DLYSLLAAIFASETGHLVLSTLHTQSPIGSLRRMEHFGIDRHLLADAALITGLIGQRLVPLLCEHCRVPWEVKVPELDEE
TRARLEKYCSVAGLCEPKNLFFRNYEGCEHCRKTVPLTGRIISRGVTGRTAIAEVVRTDARLMQLWLSHGPSVARKYWVN
QGGITRRMHLLRYLAEGLVDPLEGDLICPLDEDDIMDCEVPDGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3502 YP_001007663.1 putative type IV pilus protein Virulence YAPI Protein 3e-140 57
pilQ CAF28490.1 putative ATP binding protein Virulence YAPI Protein 7e-137 56
YpsIP31758_3731 YP_001402685.1 type IV secretion system protein Virulence YAPI Protein 7e-139 56
pilQ AAF14817.2 PilQ Virulence SPI-7 Protein 9e-117 52
pilQ NP_458633.1 nucleotide-binding protein Virulence SPI-7 Protein 1e-116 52
pilQ NP_807844.1 nucleotide-binding protein Virulence SPI-7 Protein 1e-116 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_05360 YP_001591466.1 hypothetical protein VFG2313 Protein 1e-140 57