Gene Information

Name : SPAB_05356 (SPAB_05356)
Accession : YP_001591462.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4507387 - 4507830 bp
Length : 444 bp
Strand : +
Note : COG: NOG14144 non supervised orthologous group; Psort location: extracellular, including cell wall, score: 9

DNA sequence :
ATGGGATATGCGCTGCCAGTTTTCGCGCTTTGTCTTGTCATCATCTTGATAGCCGGTGATGCACAGCACCACTCATCAGA
GCATGTACGCCTTGCGCTGCAGCAGACTCAGCCTGAACAGCTTGCAGCAGACATGCTTCGGACTGCTGATGTCGTAAATA
ACTGGCGTCACGGGCGGTCCATAACAGATGGCCCCGTATCAACCGCACTGACTGGAATGGTGCCGTTACCAGACAGTCGC
ATCAAAAGCATTATTCAAAACGGTCGCCTGTGGATCTGGGTACCTGAAACAGACGGTGTTTATGCCGCATTGCGCGCCCG
ATCAGTGTCTTCTGCGCTTGCCCTGACCGTCAGCGGCGGTCGTCTGCGGATGGCGGATGGCACTGATATGAACTTGTCTC
TGCCGTCCGGTGTGACGGAAGGCAGCATTGTTTATCTTAACTAA

Protein sequence :
MGYALPVFALCLVIILIAGDAQHHSSEHVRLALQQTQPEQLAADMLRTADVVNNWRHGRSITDGPVSTALTGMVPLPDSR
IKSIIQNGRLWIWVPETDGVYAALRARSVSSALALTVSGGRLRMADGTDMNLSLPSGVTEGSIVYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3735 YP_001402689.1 PilM protein Not tested YAPI Protein 1e-27 54
pilM CAF28486.1 putative exported protein Virulence YAPI Protein 9e-28 54
YE3505 YP_001007667.1 putative type IV pilus operon exported poprotein Virulence YAPI Protein 1e-25 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_05356 YP_001591462.1 hypothetical protein VFG2309 Protein 3e-26 49