|
Name : SPAB_05347 (SPAB_05347) Accession : YP_001591453.1 Strain : Salmonella enterica SGSC4150; SPB7 Genome accession: NC_010102 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 4501242 - 4503251 bp Length : 2010 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGGTTGTTTATCTGCGAAAAGCCCTCACAGGGGCGAGATCTTGCGAATGTTTTGGGTGCCACCCGACGTGGCGACGG TTTTCTAACTGGCCCTGGCGTCACTGTTACCTGGGCAGTAGGGCATTTGCTGGAGACCGCACCGCCTGAAGCATACGGTC AACAGTATGGCAAACCATGGTCGCTCTCTGCTCTGCCGATCCTGCCTTCCCCATGGCAGGTGGTGGTAAAAAAGGAGACG AAGTCTCAGTTCAAGGTTATTGAGCGGCTGCTGCGCCAGGTCGATGATGTGGTTATCTCCACTGATGCGGACCGGGAAGG AGAAGTAATTGCCCGTGAATTGCTGGAATACTGCCGCTGGGACGGTCCTGTACAGCGGCTTTGGCTTTCTGCCCTTGATG AAATGAGCATCCGTGCAGCTCTCCAGGATCTGCGACCGGGTGCCGAAACTCTTGGAATGTATCATGCGGGACTTGGTCGC GCTCGTGCCGACTGGCTCATTGGAATGAATCTGTCTCGTCTGTATACACTGCTTGCAGTACAGTCAGGATTCGACGGTGT GATTTCTGTCGGGCGGGTGCAGACTCCCACCCTGGCACTGGTTGTCCGGCGTGATCGGGAGATAGCGACATTCGTCCCAA AACCTTTCTGGCAGGTTAAGGCGCTTCTGAGTGCGGGAGGGAGAACTTTTCCGGCGCAATGGGTACCTGCAAAGGTTTAT ACCGACGAAGAAAAACGCTGTGTACACCAAAATATAGCGCAGCAGGTAGCGCATCTTTGCCGGCAGGCTGGAGCAGCGAC CGTAACAGAATGTGAGACGAAGCGTGAAAAAGCGGCAGCACCGCTGGCTTTTTCGCTCGGCACTTTACAACAGGCCTGTG GCCTGCTCTGGGATATGTCACCCCAGCAGGTGCTTGACACTGCACAGAGCCTCTATGAGAAACACAAGGCAACCACTTAT CCACGAACTGATTGTGGATACCTTCCTGAGTCTATGCGTGAGGAAATCCCCTCGGTGCTTTCCGCTATTGGCCTGTCTGA TCCAGAGTGTAGTTCTCTTCTTTCAGGTCTAAATACTTCGTTTGTTTCGCGTATATGGAACGACAAAAAAATCACAGCTC ACCATGGCATTATCCCTACCCGAAACGCGTTTAAGTTTTCTGCGTTAAGTGAGGCAGAGCGAAGGGTATACACCCTTATC CGCCGAAATTATCTGGCACAATTTCTTCCCCTGCACGAATCTGATATTACTCGTCTGCAGTTTGACATTGGCGGGCAACT GTTCCGCACAACAGGAAGGACGGAGATTGTAATGGGCTGGAAGGTCCTTTTCAGTAAGGAGGAAGAGGATAGTGCAGGGG ATGATGATCTCAGTATTGAACTTCCTCCTCTCAGGCAGGGTGACCGTTGCGGAGTAAACGGTGCAGAGGTCGTGCAGCAA ATGACTCGTCCGCCGGCTCACTATACTTTCGCAACACTCATCGGCGCTATGATGAACGCGTCAGCGTTTGTTACCGATAT TGCTCTTCGTAAGGTACTGAAGGACAACGCCGGATTAGGCACGGAAGCCACCCGTGCAGGTATCGTTGAGCAACTGCTGA ACCGCAGATTTATTGTGCGCAAAGGTAAGCAGCTTCGCGCGACTGATCTTGGTGCTGATGTCATTGATGCTCTGCCCTCG CAGTTAACCGACCCGGGAATGACTGCACTTTGGGAACAGGCTCTGGATGAAGTAGCAGAAGGACGCCTTACCCTGAATGA TTTTTTGCAGCGACAGGTCGGATGGACCCGTAACCTTGTCAGCATGGGAGGACAGCAGCGGGTGAGCATTAGAATACCAC CCACACCATCGTGCCCTTTATGTGGGGGGAAAACTCGCCTAAAAAAAGGACAGAAAGGAGAGTTTTGGGGGTGTACTCGT TATCCTGATTGCAAAGGAATCATCAACAACGACACCCAGAAACGTAAAAGCGCGCGTAGCTCTAAGGCTGTAAAACCAAA GAATAATTAA Protein sequence : MRLFICEKPSQGRDLANVLGATRRGDGFLTGPGVTVTWAVGHLLETAPPEAYGQQYGKPWSLSALPILPSPWQVVVKKET KSQFKVIERLLRQVDDVVISTDADREGEVIARELLEYCRWDGPVQRLWLSALDEMSIRAALQDLRPGAETLGMYHAGLGR ARADWLIGMNLSRLYTLLAVQSGFDGVISVGRVQTPTLALVVRRDREIATFVPKPFWQVKALLSAGGRTFPAQWVPAKVY TDEEKRCVHQNIAQQVAHLCRQAGAATVTECETKREKAAAPLAFSLGTLQQACGLLWDMSPQQVLDTAQSLYEKHKATTY PRTDCGYLPESMREEIPSVLSAIGLSDPECSSLLSGLNTSFVSRIWNDKKITAHHGIIPTRNAFKFSALSEAERRVYTLI RRNYLAQFLPLHESDITRLQFDIGGQLFRTTGRTEIVMGWKVLFSKEEEDSAGDDDLSIELPPLRQGDRCGVNGAEVVQQ MTRPPAHYTFATLIGAMMNASAFVTDIALRKVLKDNAGLGTEATRAGIVEQLLNRRFIVRKGKQLRATDLGADVIDALPS QLTDPGMTALWEQALDEVAEGRLTLNDFLQRQVGWTRNLVSMGGQQRVSIRIPPTPSCPLCGGKTRLKKGQKGEFWGCTR YPDCKGIINNDTQKRKSARSSKAVKPKNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 61 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 61 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 61 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 58 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 4e-174 | 53 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-172 | 52 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-160 | 51 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-155 | 50 |
