Gene Information

Name : SPAB_05251 (SPAB_05251)
Accession : YP_001591361.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 4425149 - 4427215 bp
Length : 2067 bp
Strand : +
Note : KEGG: pen:PSEEN0144 3.8e-52 type I toxin efflux ATP-binding protein; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: plasma membrane, score: 23

DNA sequence :
ATGGATAAAAAACTAGAACCTTATTATTTAAGTGCGGAAACGGCATTATCTATAGTGTCTAAAAAATTCAACATAAAAAT
TGATATCAAAGAGGATGATATAAATTTAAGATTTAAAAAGTACGACAGAAATAACACTGATGACTCTATACAAATGAAGA
ATTTCTTTTTGTCGTTAGGGCTTTCTCTACAGGATATATTATTTAATAATGGTGAGGATTTACTAAATGAGCCTATGCCG
ATTTTACTATTAACACCAGAAATGAAGTGGATGGTGTGTGTGAGTGGCGGGCAAAAAATAAAGTTGGTAAACGCGCGCGG
TGAACTCTGTTATGTTGAAATTGAGGATGAATATTTAAAAGAGTTATCTGCATTTAGTATACTACCTTTAAATAAAGTTG
TTGATAGTATAAGAGTAAAAAATATCATAAAAAACTCTTTATCGATGAACAAGATTTTTTATACTAAATACTTCTTTTCA
TCTCTTTTTATGGCAATTTTTGCGTTAACTATCCCAGTATTTAGTAATCTGTTCTATGATAAGCTTGTTCCAAGTGCTTC
GGTTTCATCTTTATTTGGCGTGGCTATAATTGTTGCTGTATTTATTGTTTTTGAGTTTATCCTTCGTACTTCGAAAGATA
TTTATCAGTCTATCACAGCAAGGCAGGATGACGTCGATATTGATATCGCCTTTCTTGAAGCGGTACTTTATAGTAAAAAG
AAAAATGGCAGATCCATGTCATCAGCATTTGTGCTATGGAATGAGTTTCAGAAAATTAAACCCGTTTTATTAAACTCGAT
CTTTCAACGTATAGCCGATATTCCAATATTTATTATATTTCTCATTGTTATATATGTAAATTTAGGTCTGGTCGTTATTG
TACCTGTTACCATGTTTATCGTCTCTATTATTATTTCTATCGTTAACCACCATTATACTAATGAGTTAATGAACAAACAA
AAAGAAGGACAGAAGAACAGGAATATTTTCATCTCAGAAGTTTTCTTATCTATTAAAATGATCCATACCTTAAATAATCA
AGGTTTACTTTTTGATTGGGTTAATACATCAAATGAACAGTCGTATCTTAACCTGAAGATAAGGAAATTAAATCTTATCT
ATCAATCTATATTGGGTAGTATGTCATCTATTACCCAAATAACCATTATGGTAATAGCCTTTTTTATGGTAATTAAGGGG
GATGTTACCACTGGCGCAATTGTTTCATCTGTCATTGTCTCTGGTCGTATCTCCGGGATCATTTCGAATTTTTCTTCTAC
ATTAATCTCTATTTTATCAGCAGAAAAAACCGGTAAGGATCTGCTTTCTTTTTTTGATGAAGATCAGGCAGAAAAAACAC
CGGCATTACAGTCCATATCAAAGTGCAATGGCGATATCTCTATCCGGGGCGTGAGTTATCAGTATGATGCTCAATCTCCG
ATGATTATTAACCGACTGTCTATAGACATACCTGCGGGGCAACGTGTCGCGGTGGTAGGCGAATGCGGAGCAGGAAAAAG
CTCATTACTGGGAATGCTATCTGGCTACCTTTCGCCAACAGACGGTGCCATCTTATATGATGGATATAACTTAGGACATT
TATCGCAGAACTTTTTTTCTCAGCATTTAAGTGTGGTGACGACACATGATGTTTTATTCACCGGAACCATTGAAAGTAAT
TTCGCGTTAAAACCGCAAAACGACAGGGGCCGGGTACTCAAGGCGCTTCATCTGGCGAACTGTGGTTTTATCTTGCAACA
TCCTATGGGGCTGAAGTTTCCGGTGAATTTTATGGCTAAAAACCTGTCATCCGGACAGCAGCAGCAGTTATTATTAGCAC
GTAGTCTGAGCAGTAACGCCAGCGTCTTTTTATGGGATGAACCAACATCAAATCTGGATGAGAATACCGAGAAGCAAATT
TTTGATAACTTAGATGAGTTTATTCATGGGAAAACGTTGATCATGGTGACGCATCGTCGATATCTGATAAAGTATTTTGA
CCGGGTTCTGGTAATGAAAGGTGGAAAAATAATCCGTGATTGTTCTCCGGATAAATTATTAATGTAA

Protein sequence :
MDKKLEPYYLSAETALSIVSKKFNIKIDIKEDDINLRFKKYDRNNTDDSIQMKNFFLSLGLSLQDILFNNGEDLLNEPMP
ILLLTPEMKWMVCVSGGQKIKLVNARGELCYVEIEDEYLKELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFS
SLFMAIFALTIPVFSNLFYDKLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKK
KNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYVNLGLVVIVPVTMFIVSIIISIVNHHYTNELMNKQ
KEGQKNRNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKG
DVTTGAIVSSVIVSGRISGIISNFSSTLISILSAEKTGKDLLSFFDEDQAEKTPALQSISKCNGDISIRGVSYQYDAQSP
MIINRLSIDIPAGQRVAVVGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTIESN
FALKPQNDRGRVLKALHLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSNASVFLWDEPTSNLDENTEKQI
FDNLDEFIHGKTLIMVTHRRYLIKYFDRVLVMKGGKIIRDCSPDKLLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4460 NP_458560.1 putative type-1 secretion protein Not tested SPI-4 Protein 0.0 99
STM4262 NP_463127.1 ABC-type bacteriocin/lantibiotic exporter Not tested SPI-4 Protein 0.0 99
SC4141 YP_219128.1 bacteriocin/lantibiotic ABC transporter Not tested SPI-4 Protein 0.0 99
spi4_R AAC26655.1 ltkB homolog Virulence SPI-4 Protein 0.0 99
siiF CAE11798.1 putative type-I secretion protein (putative inner membrane component) Virulence SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_05251 YP_001591361.1 hypothetical protein VFG0582 Protein 0.0 99