Gene Information

Name : SPAB_03584 (SPAB_03584)
Accession : YP_001589758.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2987661 - 2989673 bp
Length : 2013 bp
Strand : -
Note : KEGG: cal:orf19.4072 1.5e-05 HYR10; similar to cell surface flocculin K01186; COG: NOG06172 non supervised orthologous group; Psort location: nuclear, score: 23

DNA sequence :
ATGCAGACCGAGATCAAAACGCAGGCCACGAATCTTGCGGCGAATCTTTCCGCAGTCAGAGAAAGTGCCACAACGACGCT
GTCAGGGGAAATTAAAGGCCCGCAACTGGAAGATTTTCCCGCGCTGATCAAACAGGCGAGTCTGGATGCATTGTTTAAAT
GCGGGAAAGACGCTGAGGCGTTAAAAGAAGTTTTTACCAATTCAAATAATGTCGCCGGTAAGAAAGCGATAATGGAGTTT
GCCGGGCTCTTTCGTTCAGCGCTCAACGCCACCAGTGATTCTCCTGAGGCGAAGACGCTACTGATGAAGGTGGGGGCAGA
GTATACCGCGCAAATCATAAAAGATGGCCTGAAAGAAAAGTCAGCTTTTGGGCCATGGCTGCCAGAAACAAAGAAAGCGG
AAGCGAAGCTGGAAAACCTGGAAAAGCAGCTGTTAGATATTATCAAAAATAACACTGGTGGTGAATTAAGTAAATTATCG
ACGAATCTTGTTATGCAGGAGGTGATGCCCTATATTGCCAGCTGCATTGAACATAACTTTGGCTGTACGTTAGATCCGTT
AACCCGCAGCAATCTTACGCACCTTGTTGACAAAGCGGCGGCGAAGGCGGTTGAGGCGCTTGATATGTGCCACCAAAAAT
TAACGCAAGAGCAGGGTACCAGCGTAGGACGGGAAGCCCGGCACCTTGAAATGCAAACGTTGATACCCCTGCTGCTACGT
AATGTTTTTGCACAAATTCCTGCAGATAAACTGCCTGACCCTAAAATTCCGGAGCCTGCGGCTGGACCAGTACCTGATGG
TGGGAAAAAAGCAGAACCTACGGGTATTAATATCAATATTAATATTGATAGCAGTAACCATAGCGTGGATAACAGTAAGC
ATATTAACAATAGCCGAAGCCATGTCGATAATAGCCAGCGCCATATCGATAATAGCAACCATGATAATAGCCGGAAGACG
ATTGATAATAGCCGAACATTTATTGATAACAGCCAACGCCATGGCGAGTCACACCATTCGACTAACAGCAGCAACGTAAG
TCATAGTCATTCGCGTGTGGATTCGACTACGCATCAAACGGAGACGGCACACAGCGCCAGCACAGGGGCAATTGACCATG
GCATCGCGGGTAAAATTGACGTCACGGCTCATGCGACGGCAGAGGCTGTGACCAACGCTTCATCCGAAAGTAAAAATGGA
AAGGTGGTCACGTCAGAAAAGGGCACTACGGGTGAAACACCCTCTTTTGATGAAGTCGATGGCGTAACCAGCAAGAGCAT
TATCGGCAAGCCGGTACAGGCCACGGTGCACGGCGTTGATGATAATAAACAGCAAAGCCAGACGGCAGAGATTGTGAATG
TGAAGCCGCTTGCCAGTCAACTGGCTGGCGTCGAGAATGTTAAAACCGATACCTTACAATCAGACACGACGGTAATTACA
GGTAATAAAGCCGGTACGACCGATAATGATAATAGTCAGACAGATAAGACTGGCCCATTTTCTGGTTTGAAGTTTAAGCA
AAATAGTTTCCTCTCAACAGTACCGAGCGTTACGAATATGCATTCAATGCATTTCGACGCCCGTGAGACGTTTTTGGGTG
TGATACGTAAAGCCCTGGAGCCAGATACCTCCACACCGTTCCCTGTACGCAGAGCGTTTGACGGCTTGCGTGCGGAAATA
TTACCCAATGACACGATAAAGAGTGCAGCGTTGAAAGCGCAATGTAGCGATATTGACAAGCACCCAGAATTGAAAGCGAA
AATGGAGACTCTCAAAGAGGTCATTACTCATCATCCACAAAAAGAAAAACTGGCTGAGATTGCACTGCAGTTTGCCAGAG
AGGCGGGGCTGACCAGGCTAAAAGGGGAAACTGACTATGTGTTAAGTAATGTGCTGGACGGACTTATCGGAGACGGTAGC
TGGCGAGCTGGCCCGGCTTACGAGTCATACCTGAATAAACCTGGCGTGGATCGGGTTATTACTACCGTTGATGGCTTGCA
CATGCAGCGTTAA

Protein sequence :
MQTEIKTQATNLAANLSAVRESATTTLSGEIKGPQLEDFPALIKQASLDALFKCGKDAEALKEVFTNSNNVAGKKAIMEF
AGLFRSALNATSDSPEAKTLLMKVGAEYTAQIIKDGLKEKSAFGPWLPETKKAEAKLENLEKQLLDIIKNNTGGELSKLS
TNLVMQEVMPYIASCIEHNFGCTLDPLTRSNLTHLVDKAAAKAVEALDMCHQKLTQEQGTSVGREARHLEMQTLIPLLLR
NVFAQIPADKLPDPKIPEPAAGPVPDGGKKAEPTGINININIDSSNHSVDNSKHINNSRSHVDNSQRHIDNSNHDNSRKT
IDNSRTFIDNSQRHGESHHSTNSSNVSHSHSRVDSTTHQTETAHSASTGAIDHGIAGKIDVTAHATAEAVTNASSESKNG
KVVTSEKGTTGETPSFDEVDGVTSKSIIGKPVQATVHGVDDNKQQSQTAEIVNVKPLASQLAGVENVKTDTLQSDTTVIT
GNKAGTTDNDNSQTDKTGPFSGLKFKQNSFLSTVPSVTNMHSMHFDARETFLGVIRKALEPDTSTPFPVRRAFDGLRAEI
LPNDTIKSAALKAQCSDIDKHPELKAKMETLKEVITHHPQKEKLAEIALQFAREAGLTRLKGETDYVLSNVLDGLIGDGS
WRAGPAYESYLNKPGVDRVITTVDGLHMQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipA NP_461803.1 secreted effector protein Virulence SPI-1 Protein 0.0 99
sipA YP_217801.1 cell invasion protein Virulence SPI-1 Protein 0.0 99
sipA NP_457276.1 pathogenicity island 1 effector protein (function unknown) Virulence SPI-1 Protein 0.0 98
sipA NP_806485.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03584 YP_001589758.1 hypothetical protein VFG0543 Protein 0.0 99