Gene Information

Name : SPAB_03575 (SPAB_03575)
Accession : YP_001589749.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2979324 - 2980388 bp
Length : 1065 bp
Strand : -
Note : COG: NOG07990 non supervised orthologous group; Psort location: endoplasmic reticulum, score: 9

DNA sequence :
GTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGTCAACTCCCTGATATACCTGCCGATAGCTTTTTTATCCCGCTGGA
CCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATGCGACCGAAATTATACTCCATGAGCTGAAAGAAGGAAATT
CTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGAATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCG
TGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGAACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGC
ACTGGCCGGGTTTTTTATATTGGGAATTGGGACGGTGGGGACGTTATGGATACTTAACTCGCCGCAGCGGCAGGCCGCAG
AGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGCTTTCAGGTGTTGCCAGGACGGGACAAAATGCTCTATGTCGCTGCG
CAAAATGAAAGAGATACGCTGTGGGCTCGTCAGGTTTTAGCGAGGGGCGATTATGATAAAAATGCGCGAGTGATTAACGA
AAACGAAGAAAATAAGCGTATCTCTACCTGGCTGGATACCTATTATCCGCAGCTGGCTTATTATCGGCTTCATTTCGATG
AGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACAATATGAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAG
CTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACGTTGATGGACGATGTTACCGCCGCAGGCCAGGCGGAAGC
GGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAGGGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCG
ATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTACCGCACATGGGGAGGACGCTATGTGCAGTTTGCG
ATCGAATTAAAAGATGACTGGCTCAAGGGACGCTCATTTCAGTACGGGGCGGAAGGTTATATCAAAATGAGCCCAGGCCA
TTGGTATTTCCCAAGCCCACTTTAA

Protein sequence :
MVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEP
WVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTLWILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAA
QNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYYPQLAYYRLHFDEPRKPVFWLSRQRNNMSKKELEVLSQK
LRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFA
IELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgH NP_461795.1 needle complex inner membrane protein Virulence SPI-1 Protein 1e-163 99
prgH NP_457268.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 5e-164 99
prgH NP_806477.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 5e-164 99
prgH YP_217793.1 cell invasion protein Virulence SPI-1 Protein 8e-164 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03575 YP_001589749.1 hypothetical protein VFG0536 Protein 6e-164 99