Gene Information

Name : SPAB_03574 (SPAB_03574)
Accession : YP_001589748.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2979057 - 2979299 bp
Length : 243 bp
Strand : -
Note : COG: NOG14694 non supervised orthologous group; Psort location: nuclear, score: 23

DNA sequence :
ATGCCAACACCTTGGTCAGGCTATCTGGATGAAGTTTCAGCAAAATTTGATACAGGCGTTGATAATCTACAAACGCAGGT
AACAGAAGCGCTGGATAAATTAGCAGCAAAACCCTCCGATCCGGCGCTACTGGCGGCGTATCAGAGTAAGCTCTCGGAAT
ATAACTTGTACCGTAACGCGCAATCGAACACGGTAAAAGTCTTTAAGGATATTGATGCTGCCATTATTCAGAACTTCCGT
TAA

Protein sequence :
MPTPWSGYLDEVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 2e-30 98
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 1e-30 98
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 4e-30 98
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 4e-30 98
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 2e-30 98
ECs3718 NP_311745.1 EprI Not tested LIM Protein 6e-20 62
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 1e-16 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03574 YP_001589748.1 hypothetical protein VFG0535 Protein 5e-31 98
SPAB_03574 YP_001589748.1 hypothetical protein VFG0996 Protein 3e-19 69
SPAB_03574 YP_001589748.1 hypothetical protein VFG2466 Protein 1e-17 56