Gene Information

Name : SPAB_03560 (SPAB_03560)
Accession : YP_001589734.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2971155 - 2971976 bp
Length : 822 bp
Strand : +
Note : KEGG: rru:Rru_A2894 4.2e-85 ABC transporter component K02074; COG: COG1121 ABC-type Mn/Zn transport systems, ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGAGTCAATCTGCGATTACCGTTGATCAGGTCACGGTGACGTATCGCAACGGTCATACCGCCCTACGGGACGCCACTTT
TCAGGTGCCTGGCGGTTCAATCGCCGCGCTGGTAGGCGTAAATGGTTCCGGTAAGTCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCAGGGCGATATCACTATCCTGCAACAGTCAGTCAACAAGGCGCTGAAAAAAAACCTCATTGCT
TATGTTCCGCAATCGGAAGAAGTGGACTGGTCATTTCCGGTACTGGTAGAAGATGTGGTGATGATGGGACGCTACGGCCA
TATGGGCTGGCTACGCCGTCCCACTGCGCATGATCACGCCTGTGTTGACGCCGCGCTGGCGCGGGTGGATATGCAGGAAT
ATCGTCACAGGCAGATTGGCGAGCTGTCCGGCGGGCAGAAAAAACGTGTGTTTCTTGCCAGGGCCATCGCTCAGGATGGA
CAGGTAATCCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCGCGAATCATCGATCTACTACGGGAACT
GCGCGATGAAGGCCGCACGATGCTGGTCTCAACGCATAATCTCGGCTCCGTCACCGAGTTTTGCGACTATACGGTAATGA
TTAAAGGAACCGTACTGGCCAGCGGCCCTACCGAAACCACGTTTACCGCCGCGAATCTGGAACAGGCGTTTAGCGGCGTT
CTACGTCATATCGCGCTAAGCGGAGGCGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGGCGCGTGGC
CAGCGGAGGAAAATCGTCATGA

Protein sequence : 
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNKALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAFSGV
LRHIALSGGEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-128 100
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-128 100
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-126 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-126 99
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-127 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03560 YP_001589734.1 hypothetical protein BAC0350 Protein 3e-128 100
SPAB_03560 YP_001589734.1 hypothetical protein BAC0440 Protein 7e-80 63
SPAB_03560 YP_001589734.1 hypothetical protein BAC0400 Protein 5e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03560 YP_001589734.1 hypothetical protein VFG0526 Protein 2e-128 100