Gene Information

Name : SPAB_03429 (SPAB_03429)
Accession : YP_001589610.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2868695 - 2869891 bp
Length : 1197 bp
Strand : +
Note : COG: COG0582 Integrase; Psort location: nuclear, score: 23

DNA sequence : 
GTGGCACGGACAACGCGCTCCCTGACCAACACCGAAGTTCTGCGCACTAAAGCTTTAGAGAAGGATCTAACGCTGCATGA
TGGCGATGGCCTTTTCCTGATAGTGAAAACCAGCGGGAAAAAGCTCTGGCGCTTCCGTTATCAACGTCCGGCGACAAAAC
AGCGGACAATGATGGGTCTAGGTGCTTTCCCCGCTCTTTCACTTGCTGACGCCCGAGGGATAAGAGCGGATTACCTTGCC
TTGTTAGCCAACGGAATTGACCCACAAATTCAGGCCGAAGTTGCAGAGGAACAGCAGCAAATCGCTCTGGACAGTATTTT
TTCAACGGTCGCCGCTAACTGGTTCCAGCTCAAAAGCAAAAGCGTTACCCCTGATTACGCTAAAGATATATGGCGTCCAC
TGGAAAAAGACGTATTTCCAGCTATCGGGGAGATCCCTGTCCAGCAAATCAAAGCCAGAACATTGATTGAAGCGCTTGAG
CCAATAAAAGCTCGTGGGGCACTTGAGACAGTACGCCGGTTGGTGCAGCGCATTAACGAAATAATGATTTATGCTGTCAA
CACTGGTCTGATAGATGCGAATCCAGCATCAGGTATTGGAATGGCTTTTGAGAAGCCCAAAAAACAAAACATGCCGACGC
TTCGGCCAGAAGAGTTACCAAAACTCATGCATTCTTTGGTGATGTCAAATCTCTCTGTTTCGACTTGCTGTTTCATTGAA
TGGCAACTCCTGACGCTTGTGCGCCCTTCTGAAGCCTCCGGTGCCCGTTGGGCAGAGATCGATCTCGATACGAAGCTCTG
GACTATTCCAGCCGAACGGATGAAAGCTAAGCGGGAACACATTGTTCTTTTATCACCACAGGCATTAGAGATTCTGGATG
TAATGAAGCCAATTAGCGCTCACCGAGAACATGTTTTTCCCAGCAGGAATGATCCAAAACAAGCTATGAATAGCCAGACG
GCTAATGCTGCTTTAAAACGAATTGGATTCGGAGGTAAGCTTGTAGCACATGGGTTACGTTCAATTGCGAGTACGGCTAT
GAATGAGGCCGGTTTTAGCCCAGACATAATTGAGGCAGCTCTAGCACATAGCGATAAAAATGAGGTACGACGCGCATATA
ATCGCTCAACTTATTTAGAGCAGCGAAAAGATCTGATGTCTTGGTGGGGTTTATTTGTTAATAAGACTATTAAATAA

Protein sequence : 
MARTTRSLTNTEVLRTKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGIRADYLA
LLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRPLEKDVFPAIGEIPVQQIKARTLIEALE
PIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMHSLVMSNLSVSTCCFIE
WQLLTLVRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVLLSPQALEILDVMKPISAHREHVFPSRNDPKQAMNSQT
ANAALKRIGFGGKLVAHGLRSIASTAMNEAGFSPDIIEAALAHSDKNEVRRAYNRSTYLEQRKDLMSWWGLFVNKTIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20803.1 integrase Not tested VPI Protein 5e-101 52
unnamed AAA82714.1 integrase Not tested VPI Protein 5e-101 52
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 6e-101 52
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 6e-101 52
int AAK20773.1 integrase Not tested VPI Protein 5e-101 52
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 3e-100 51
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-85 47
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-85 47
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 6e-86 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03429 YP_001589610.1 hypothetical protein VFG1092 Protein 6e-86 47