Gene Information

Name : SPAB_03344 (SPAB_03344)
Accession : YP_001589535.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2798758 - 2799180 bp
Length : 423 bp
Strand : +
Note : COG: NOG28061 non supervised orthologous group; Psort location: cytoplasmic, score: 23

DNA sequence :
GTGGATATCGACGGTATTGAACTCGCCAGCCTGATCGATGTGGTCTGTGATAACGGATATTCACTTCGCGTTGCTGACGA
GCCCGGAAAGCTGATTGTTGAAGATCCGCTTCCGCCCGTCGCCCGCGTTAACGGCATTCAGTGCAGCACCGCACATATCA
CGGAGAAAGACAATGCTCTGCTGTTTACCCTTTCACACCAGTATGAAGACTTTGGCGAGTCGGAGTGGATTTTGTATACC
GGCTCCGGCTACTTACTCCACCTGGAGGCATGGTCATTTCCGGTTCTGCGGCTTAAACGGCTGGGGCTGTCGAAAGCCTG
TCGACGGTTAGTGGTGACGCTGATACGCCGTTACGCCGCTGGTATTCTCCACCTGGATGCTTTCGGCGAACTCCTGCCAG
GCTTTGCCACCTTCGACTGGTAA

Protein sequence :
MDIDGIELASLIDVVCDNGYSLRVADEPGKLIVEDPLPPVARVNGIQCSTAHITEKDNALLFTLSHQYEDFGESEWILYT
GSGYLLHLEAWSFPVLRLKRLGLSKACRRLVVTLIRRYAAGILHLDAFGELLPGFATFDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08479.1 unknown Not tested SRL Protein 2e-40 68
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 8e-41 68
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 8e-41 68
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 2e-41 67
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 6e-39 67
unnamed AAL57574.1 unknown Not tested LEE Protein 2e-38 66
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 4e-38 65
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-39 65
unnamed AAC31487.1 L0008 Not tested LEE Protein 2e-40 65
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 2e-40 65
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 3e-40 65
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 3e-40 65
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 3e-38 63
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 2e-37 63
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 1e-38 63
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 8e-39 63
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 1e-36 63
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 1e-38 63
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 1e-37 61
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 2e-37 61
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 2e-37 61
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-35 60
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-35 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03344 YP_001589535.1 hypothetical protein VFG1070 Protein 8e-41 68
SPAB_03344 YP_001589535.1 hypothetical protein VFG1621 Protein 9e-42 67
SPAB_03344 YP_001589535.1 hypothetical protein VFG1531 Protein 2e-38 65
SPAB_03344 YP_001589535.1 hypothetical protein VFG0787 Protein 8e-41 65
SPAB_03344 YP_001589535.1 hypothetical protein VFG1683 Protein 6e-39 63
SPAB_03344 YP_001589535.1 hypothetical protein VFG0664 Protein 4e-38 61